Novel SETBP1 mutation in a chinese family with intellectual disability

BMC Med Genomics. 2023 Oct 5;16(1):233. doi: 10.1186/s12920-023-01649-x.

Abstract

Background: Intellectual disability (ID) is characterized by an IQ < 70, which implies below-average intellectual function and a lack of skills necessary for daily living. ID may occur due to multiple causes, such as metabolic, infectious, and chromosomal causes. ID affects approximately 1-3% of the population; however, the cause can be identified in only 25% of clinical patients.

Methods: To find the cause of genetic ID in a family, we performed whole-exome sequencing and Sanger sequencing to confirm the presence of a SETBP1 variant and real-time quantitative polymerase chain reaction to detect SETBP1 expression in the proband and normal controls.

Results: A novel variant, c.942_943insGT (p. Asp316TrpfsTer28), was found in SETBP1. Furthermore, we observed that SETBP1 expression in patients was only 20% that of normal controls (P < 0.05).

Conclusion: A heterozygous variant in SETBP1 associated with ID was found. This report provides further evidence for its genetic basis and support for clinical genetic diagnosis.

Keywords: Autosomal dominant mental retardation 29; Intellectual disability; SETBP1; Whole-genome sequencing.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Asian People / genetics
  • Carrier Proteins / genetics
  • East Asian People
  • Family
  • Humans
  • Intellectual Disability* / genetics
  • Mutation
  • Nuclear Proteins / genetics
  • Pedigree

Substances

  • SETBP1 protein, human
  • Carrier Proteins
  • Nuclear Proteins