Heterogeneous nuclear ribonucleoprotein K promotes cap-independent translation initiation of retroviral mRNAs

Nucleic Acids Res. 2024 Mar 21;52(5):2625-2647. doi: 10.1093/nar/gkad1221.

Abstract

Translation initiation of the human immunodeficiency virus-type 1 (HIV-1) genomic mRNA (vRNA) is cap-dependent or mediated by an internal ribosome entry site (IRES). The HIV-1 IRES requires IRES-transacting factors (ITAFs) for function. In this study, we evaluated the role of the heterogeneous nuclear ribonucleoprotein K (hnRNPK) as a potential ITAF for the HIV-1 IRES. In HIV-1-expressing cells, the depletion of hnRNPK reduced HIV-1 vRNA translation. Furthermore, both the depletion and overexpression of hnRNPK modulated HIV-1 IRES activity. Phosphorylations and protein arginine methyltransferase 1 (PRMT1)-induced asymmetrical dimethylation (aDMA) of hnRNPK strongly impacted the protein's ability to promote the activity of the HIV-1 IRES. We also show that hnRNPK acts as an ITAF for the human T cell lymphotropic virus-type 1 (HTLV-1) IRES, present in the 5'UTR of the viral sense mRNA, but not for the IRES present in the antisense spliced transcript encoding the HTLV-1 basic leucine zipper protein (sHBZ). This study provides evidence for a novel role of the host hnRNPK as an ITAF that stimulates IRES-mediated translation initiation for the retroviruses HIV-1 and HTLV-1.

MeSH terms

  • 5' Untranslated Regions
  • Heterogeneous-Nuclear Ribonucleoprotein K* / genetics
  • Heterogeneous-Nuclear Ribonucleoprotein K* / metabolism
  • Humans
  • Internal Ribosome Entry Sites / genetics
  • Phosphorylation
  • Protein Biosynthesis
  • Protein Processing, Post-Translational
  • Protein-Arginine N-Methyltransferases / metabolism
  • RNA, Messenger / genetics
  • RNA, Messenger / metabolism
  • Repressor Proteins / metabolism
  • Retroviridae* / genetics

Substances

  • 5' Untranslated Regions
  • Heterogeneous-Nuclear Ribonucleoprotein K
  • Internal Ribosome Entry Sites
  • PRMT1 protein, human
  • Protein-Arginine N-Methyltransferases
  • Repressor Proteins
  • RNA, Messenger
  • HNRNPK protein, human