A heptanucleotide sequence mediates ribosomal frameshifting in mammalian cells

J Virol. 1993 Sep;67(9):5579-84. doi: 10.1128/JVI.67.9.5579-5584.1993.

Abstract

Ribosomal frameshifting is an essential requirement for replication of many viruses and retrovirus-like elements. It is regarded as a potential target for antiretroviral therapy. It has been shown that the frameshifting event takes place in the -1 direction within a sequence, the slippery sequence, which is usually followed by structured RNA. To distinguish between the basic sequence requirements and the modulating elements in intact cells, we have established a sensitive assay system for quantitative determination of ribosomal frameshifting in mammalian cell culture. In this assay system, the gag and pol genes of human immunodeficiency virus type 1 are replaced by the genes for the functional enzymes beta-galactosidase and luciferase, respectively. The sensitivity of the test system allows us to demonstrate for the first time that the slippery sequence, a heptanucleotide, is sufficient to mediate a basal level of ribosomal frameshifting independent of its position within a gene. The stem-loop sequence serves only as a positive modulator. These data indicate that frameshifting could also occur during translation of cellular genes in which a slippery sequence is present within the reading frame. The resulting putative transframe proteins might have a functional importance for cellular processes.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Base Sequence
  • Cell Line
  • Cell Transformation, Viral*
  • DNA / genetics
  • DNA / metabolism
  • Frameshift Mutation*
  • Genes, gag
  • Genes, pol
  • HIV-1 / genetics
  • HIV-1 / physiology*
  • HeLa Cells
  • Humans
  • Luciferases / metabolism
  • Mammals
  • Molecular Sequence Data
  • Nucleic Acid Conformation
  • Oligodeoxyribonucleotides
  • Plasmids
  • Recombinant Fusion Proteins / metabolism
  • Transfection*
  • Virus Replication*
  • beta-Galactosidase / metabolism

Substances

  • Oligodeoxyribonucleotides
  • Recombinant Fusion Proteins
  • DNA
  • Luciferases
  • beta-Galactosidase