Mutational analysis of the CDKN2 gene in metastases from patients with cutaneous malignant melanoma

Br J Cancer. 1996 Feb;73(3):344-8. doi: 10.1038/bjc.1996.59.

Abstract

We analysed 26 metastases from 25 patients with sporadic cutaneous malignant melanoma for alterations in the CDKN2 gene by a combined polymerase chain reaction/single-strand conformation polymorphism (PCR/SSCP)/nucleotide sequencing approach. Eleven alterations (one in exon 1, five in exon 2 and five in the 3' non-coding sequence of the exon 3 region) were concordantly and independently detected by both SSCP and nucleotide sequence analysis. Two of the exon 2 changes and the five changes in the non-coding exon 3 region are likely to represent natural polymorphism. Four (15%) of 26 metastases thus had CDKN2 mutations and belonged to 3 (12%) of 25 patients. Semi-quantitative PCR furthermore revealed no sign of homozygous deletions of the CDKN2 exon 2 region. The results support an involvement of the CDKN2 product in the development of a subgroup of sporadic melanomas and encourage the search for alterations in additional genes of the 9p21 region.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alleles
  • Amino Acid Sequence
  • Base Sequence
  • Carrier Proteins / genetics*
  • Cyclin-Dependent Kinase Inhibitor p16
  • DNA Primers / chemistry
  • DNA, Neoplasm / genetics
  • Female
  • Genes, Tumor Suppressor*
  • Humans
  • Male
  • Melanoma / genetics*
  • Molecular Sequence Data
  • Neoplasm Metastasis
  • Polymorphism, Single-Stranded Conformational
  • Protein Kinase Inhibitors
  • Sequence Deletion
  • Skin Neoplasms / genetics*

Substances

  • Carrier Proteins
  • Cyclin-Dependent Kinase Inhibitor p16
  • DNA Primers
  • DNA, Neoplasm
  • Protein Kinase Inhibitors