Identification of a novel interleukin-15 (IL-15) transcript isoform generated by alternative splicing in human small cell lung cancer cell lines

Oncogene. 1996 May 16;12(10):2187-92.

Abstract

IL-15 is a cytokine promoting growth and differentiation of T, B and NK lymphocytes. By RT-PCR analysis, using primers allowing amplification of the entire IL-15 mRNA coding region, 9/11 small cell lung cancer (SCLC) cell lines displayed detectable IL-15 gene expression. In addition to the expected band sizing 524 bp, a larger band was also observed. Cloning and sequence analysis of the larger cDNA from two SCLC cell lines revealed a size of 643 hp due to the presence of additional 119 hp within the previously reported IL-15 cDNA sequence. The 119 hp sequence matched with an IL-15 genomic sequence downstream the IL-15 second coding exon and may represent a previously unreported alternative exon (exon A). The SCLC-associated IL-15 mRNA isoform has a shorter open reading frame (ORF) due to stop codons in exon A, followed by a new AUG codon. The predicted IL-15 precursor protein displays a shorter signal peptide but shares the same aminoacidic composition of mature IL-15 protein. A possible functional role of IL-15, different from 'IL-2-like' activity, in human tumours, is suggested.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alternative Splicing*
  • Amino Acid Sequence
  • Base Sequence
  • Carcinoma, Small Cell / genetics*
  • Carcinoma, Small Cell / metabolism*
  • Exons
  • Humans
  • Interleukin-15
  • Interleukins / biosynthesis*
  • Interleukins / genetics*
  • Isomerism
  • Lung Neoplasms / genetics*
  • Lung Neoplasms / metabolism*
  • Molecular Sequence Data
  • Open Reading Frames
  • Polymerase Chain Reaction
  • RNA, Messenger / metabolism
  • Sequence Homology, Amino Acid
  • Sequence Homology, Nucleic Acid
  • Transcription, Genetic
  • Tumor Cells, Cultured

Substances

  • Interleukin-15
  • Interleukins
  • RNA, Messenger

Associated data

  • GENBANK/X94222
  • GENBANK/X94223