Genomic structure and expression of the human heme A:farnesyltransferase (COX10) gene

Genomics. 1997 May 15;42(1):161-4. doi: 10.1006/geno.1997.4711.

Abstract

Charcot-Marie-Tooth disease type 1A (CMT1A) is associated with a 1.5-Mb tandem DNA duplication in chromosome 17p11.2-p12, while hereditary neuropathy with liability to pressure palsies (HNPP) is associated with a 1.5-Mb deletion at this locus. The 1.5-Mb CMT1A monomer unit duplicated in CMT1A and deleted in HNPP is flanked by two 24-kb direct repeats termed the CMT1A-REPs. Recently, sequence analysis of the CMT1A-REPs revealed that they contain an internal exon of the COX10 gene. To characterize COX10, encoding human heme A:farnesyltransferase, the genomic region was isolated and the gene structure and expression profile were determined. COX10 spans approximately 135 kb and consists of seven exons. Exons I-V are telomeric to the 1.5-Mb CMT1A monomer unit, whereas exon VII is located within this 1.5-Mb region. Exon VI is contained within the distal CMT1A-REP. All splice sites conform to the GT/AG rule. Analysis of the putative promoter region of the COX10 gene indicates that it lacks conventional TATA and CAAT boxes, but it does have several potential transcription factor-binding sites. This gene is expressed in multiple tissues with highest expression observed in the heart, skeletal muscle, and testis.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Alkyl and Aryl Transferases*
  • Base Sequence
  • Charcot-Marie-Tooth Disease / enzymology
  • Charcot-Marie-Tooth Disease / genetics
  • Chromosome Mapping
  • Chromosomes, Human, Pair 17 / genetics
  • DNA Primers / genetics
  • Electron Transport Complex IV
  • Exons
  • Gene Expression
  • Hereditary Sensory and Motor Neuropathy / enzymology
  • Hereditary Sensory and Motor Neuropathy / genetics
  • Humans
  • Introns
  • Membrane Proteins / genetics*
  • Molecular Sequence Data
  • Multigene Family
  • Mutation
  • Polymerase Chain Reaction
  • Sequence Deletion
  • Transferases / genetics*

Substances

  • DNA Primers
  • Membrane Proteins
  • COX10 protein, human
  • Electron Transport Complex IV
  • Transferases
  • Alkyl and Aryl Transferases

Associated data

  • GENBANK/U82004
  • GENBANK/U82005
  • GENBANK/U82006
  • GENBANK/U82007
  • GENBANK/U82008
  • GENBANK/U82009
  • GENBANK/U82010