Susceptibility to type 1 diabetes in the Senegalese population is linked to HLA-DQ and not TAP and LMP genes

Diabetes Care. 1997 Aug;20(8):1299-303. doi: 10.2337/diacare.20.8.1299.

Abstract

Objective: To investigate the frequency of the transporter associated with antigen processing (TAP) and large multifunctional protease (LMP) alleles and their role in the susceptibility to type 1 diabetes, in comparison with the well-known HLA-DQ alleles susceptibility, in Senegalese subjects.

Research design and methods: Three loci in the TAP/LMP region were analyzed in 92 type 1 diabetic subjects and 117 nondiabetic control subjects by means of polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP).

Results: No association was found between the studied polymorphisms of TAP1, TAP2, and LMP2 and type 1 diabetes in the Senegalese population, in contrast to the HLA-DQA1 and DQB1 genes, which were associated with type 1 diabetes.

Conclusions: Diabetogenic genes in the class II HLA region are located near the DQA1 and DQB1 loci rather than the TAP and LMP loci.

MeSH terms

  • ATP-Binding Cassette Transporters / genetics*
  • Adolescent
  • Adult
  • Child
  • DNA / analysis
  • DNA Primers / chemistry
  • Diabetes Mellitus, Type 1 / genetics*
  • Diabetes Mellitus, Type 1 / immunology
  • Endopeptidases / genetics*
  • Female
  • Gene Frequency
  • Genes, MHC Class II / genetics*
  • Genotype
  • HLA-DQ Antigens / genetics*
  • HLA-DQ Antigens / immunology
  • Humans
  • Major Histocompatibility Complex
  • Male
  • Polymerase Chain Reaction
  • Polymorphism, Genetic
  • Polymorphism, Restriction Fragment Length
  • Senegal

Substances

  • ATP-Binding Cassette Transporters
  • DNA Primers
  • HLA-DQ Antigens
  • DNA
  • Endopeptidases