Cloning of a novel human ELF-1-related ETS transcription factor, ELFR, its characterization and chromosomal assignment relative to ELF-1

Gene. 1998 Mar 27;210(1):71-8. doi: 10.1016/s0378-1119(98)00022-5.

Abstract

The ETS gene family encodes a group of proteins that function as transcription factors under physiological conditions and, if aberrantly expressed, can lead to cellular transformation. ETS transcription factors are characterized by a unique conserved DNA binding domain. A subset of these proteins is rearranged with EWS in Ewing tumors (ET). We recently described a spectrum of ETS genes coexpressed with EWS-FLI1 in an ETcell line to define proteins that potentially compete in target site selection. We now report on the cloning and characterization of a novel ETS family member, ELFR, displaying 92% homology to ELF-1 in its DNA binding domain while diverging in the rest of the protein. ELFR expression was found in a very tissue restricted pattern with the highest abundancy in placenta. We also report the chromosomal assignment of ELFR and ELF-1 to Xq26 and 13q13, respectively, by means of fluorescence in-situ hybridization (FISH).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Chromosome Mapping*
  • Chromosomes, Human, Pair 13 / genetics
  • Cloning, Molecular
  • DNA-Binding Proteins / chemistry*
  • DNA-Binding Proteins / genetics
  • Gene Expression Regulation, Neoplastic / genetics
  • Genes, Neoplasm / genetics
  • Genes, Reporter / genetics
  • Humans
  • In Situ Hybridization, Fluorescence
  • Molecular Sequence Data
  • RNA, Messenger / metabolism
  • Sarcoma, Ewing / chemistry*
  • Sequence Alignment
  • Sequence Analysis, DNA
  • Transcription Factors / chemistry*
  • Transcription Factors / genetics
  • Tumor Cells, Cultured
  • X Chromosome / genetics

Substances

  • DNA-Binding Proteins
  • ELF4 protein, human
  • RNA, Messenger
  • Transcription Factors

Associated data

  • GENBANK/AF000670