Analysis of the human GDNF gene reveals an inducible promoter, three exons, a triplet repeat within the 3'-UTR and alternative splice products

Hum Mol Genet. 1998 Nov;7(12):1873-86. doi: 10.1093/hmg/7.12.1873.

Abstract

Glial cell line-derived neurotrophic factor (GDNF), a distant member of the TGF-beta superfamily, is a survival factor for various neurons, making it a potential therapeutic agent for neurodegenerative disorders. Here we present the genomic structure and characterization of the promoter of the human GDNF (hGDNF) gene. It contains three exons coding for a cDNA of 4.6 kb including large 5'- and 3'-untranslated regions (UTRs). The 3'-UTR contains a polymorphic AGG repeat that appears not to be expanded in patients suffering from different neurodegenerative disorders. RT-PCR results in at least three different hGDNF transcripts including one that lacks exon 2. Transient expression experiments reveal that exon 2 is essential for proper cellular processing to yield a secreted form of hGDNF, whereas expression of exon 3 alone is sufficient to code for a mature form of hGDNF retained within the cell. Our data show that the hGDNF gene is driven by a TATA-containing promoter preceding exon 1. A second promoter element has been mapped to a region 5' of exon 2. Both promoters are in close proximity to CpG islands covering exons 1 and 2. Using luciferase as a reporter gene, the TATA-containing hGDNF promoter facilitates a 20- to 40-fold increase in transcription when compared with a corresponding promoterless construct, whereas the second promoter confers only weak activity. Furthermore, fibroblast growth factor 2, tetradecanoyl 12-phorbol acetate, an inflammatory agent, and cAMP increase promoter activity, suggesting that GDNF transcriptional regulation is a target of exogenous signals.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alternative Splicing / genetics*
  • Amino Acid Sequence
  • Animals
  • Bacteriophage P1 / genetics
  • Base Sequence
  • Carcinogens / pharmacology
  • Cell Line
  • Cyclic AMP / pharmacology
  • DNA / chemistry
  • DNA / genetics
  • DNA, Complementary / genetics
  • DNA, Recombinant
  • Databases, Factual
  • Eukaryotic Cells / cytology
  • Eukaryotic Cells / drug effects
  • Eukaryotic Cells / metabolism
  • Exons / genetics*
  • Fibroblast Growth Factor 2 / pharmacology
  • Gene Expression
  • Gene Expression Regulation / drug effects
  • Gene Library
  • Genes / genetics*
  • Genetic Vectors
  • Glial Cell Line-Derived Neurotrophic Factor
  • Humans
  • Introns / genetics
  • Mice
  • Molecular Sequence Data
  • Nerve Growth Factors*
  • Nerve Tissue Proteins / genetics*
  • Neurodegenerative Diseases / genetics
  • Polymorphism, Genetic
  • Promoter Regions, Genetic / drug effects
  • Promoter Regions, Genetic / genetics
  • Promoter Regions, Genetic / physiology
  • Recombinant Fusion Proteins / genetics
  • Sequence Analysis, DNA
  • Sequence Homology, Amino Acid
  • Sequence Homology, Nucleic Acid
  • Tetradecanoylphorbol Acetate / pharmacology
  • Transcription, Genetic / genetics
  • Trinucleotide Repeats / genetics*
  • Tumor Cells, Cultured

Substances

  • Carcinogens
  • DNA, Complementary
  • DNA, Recombinant
  • GDNF protein, human
  • Gdnf protein, mouse
  • Glial Cell Line-Derived Neurotrophic Factor
  • Nerve Growth Factors
  • Nerve Tissue Proteins
  • Recombinant Fusion Proteins
  • Fibroblast Growth Factor 2
  • DNA
  • Cyclic AMP
  • Tetradecanoylphorbol Acetate

Associated data

  • GENBANK/AF063586