Identifiers.org

The American Type Culture Collection (ATCC) is a private, nonprofit biological resource center whose mission focuses on the acquisition, authentication, production, preservation, development and distribution of standard reference microorganisms, cell lines and other materials for research in the life sciences.

Home: http://www.atcc.org/
Institution: American Type Culture Collection, Manassas, Virginia
Location: USA
Example: http://identifiers.org/atcc:11303
Uptime: 98%

The International Protein Index (IPI) provides complete nonredundant data sets representing the human, mouse and rat proteomes, built from the Swiss-Prot, TrEMBL, Ensembl and RefSeq databases

Synonyms: International Protein Index
URI: http://identifiers.org/ipi
Identifier pattern: ^IPI\d{8}$
Example: http://identifiers.org/ipi:IPI00000001

The International Protein Index (IPI) provides complete nonredundant data sets representing the human, mouse and rat proteomes, built from the Swiss-Prot, TrEMBL, Ensembl and RefSeq databases

Home: http://www.ebi.ac.uk/IPI
Institution: European Bioinformatics Institute, Hinxton, Cambridge
Location: UK
Example: http://identifiers.org/ipi:IPI00000001
Uptime: 86%

GabiPD (Genome Analysis of Plant Biological Systems Primary Database) constitutes a repository for a wide array of heterogeneous data from high-throughput experiments in several plant species. These data (i.e. genomics, transcriptomics, proteomics and metabolomics), originating from different model or crop species, can be accessed through a central gene 'Green Card'.

Synonyms: GABI PD
URI: http://identifiers.org/gabi
Identifier pattern: ^\w+$
Example: http://identifiers.org/gabi:2679240

GabiPD (Genome Analysis of Plant Biological Systems Primary Database) constitutes a repository for a wide array of heterogeneous data from high-throughput experiments in several plant species. These data (i.e. genomics, transcriptomics, proteomics and metabolomics), originating from different model or crop species, can be accessed through a central gene 'Green Card'.

Primary: true
Home: http://www.gabipd.org/
Institution: Max Planck Institute of Molecular Plant Physiology, Berlin
Location: Germany
Example: http://identifiers.org/gabi:2679240
Uptime: 91%

The BDGP EST database collects the expressed sequence tags (ESTs) derived from a variety of tissues and developmental stages for Drosophila melanogaster. All BDGP ESTs are available at dbEST (NCBI).

Synonyms: Berkeley Drosophila Genome Project EST
URI: http://identifiers.org/bdgp.est
Identifier pattern: ^\w+(\.)?(\d+)?$
Example: http://identifiers.org/bdgp.est:EY223054.1

The BDGP EST database collects the expressed sequence tags (ESTs) derived from a variety of tissues and developmental stages for Drosophila melanogaster. All BDGP ESTs are available at dbEST (NCBI).

Home: http://www.ncbi.nlm.nih.gov/dbEST/index.html
Institution: National Center for Biotechnology Information (NCBI)
Location: USA
Example: http://identifiers.org/bdgp.est:EY223054.1
Uptime: 100%

The Arabidopsis Information Resource (TAIR) maintains a database of genetic and molecular biology data for the model higher plant Arabidopsis thaliana. This provides protein information for a given gene model and provides links to other sources such as UniProtKB and GenPept

URI: http://identifiers.org/tair.protein
Identifier pattern: ^AASequence:\d{10}$
Example: http://identifiers.org/tair.protein:AASequence:1009107926

The Arabidopsis Information Resource (TAIR) maintains a database of genetic and molecular biology data for the model higher plant Arabidopsis thaliana. This provides protein information for a given gene model and provides links to other sources such as UniProtKB and GenPept

Home: http://arabidopsis.org/index.jsp
Institution: Carnegie Institution of Washington Department of Plant Biology and National Center for Genome Resources (NCGR)
Location: USA
Example: http://identifiers.org/tair.protein:AASequence:1009107926
Uptime: 99%

H-Invitational Database (H-InvDB) is an integrated database of human genes and transcripts. It provides curated annotations of human genes and transcripts including gene structures, alternative splicing isoforms, non-coding functional RNAs, protein functions, functional domains, sub-cellular localizations, metabolic pathways, protein 3D structure, genetic polymorphisms (SNPs, indels and microsatellite repeats), relation with diseases, gene expression profiling, molecular evolutionary features, protein-protein interactions (PPIs) and gene families/groups. This datatype provides access to the 'Protein' view.

URI: http://identifiers.org/hinv.protein
Identifier pattern: ^HIP\d{9}(\.\d+)?$
Example: http://identifiers.org/hinv.protein:HIP000030660