Identifiers.org

The Pfam database contains information about protein domains and families. For each entry a protein sequence alignment and a Hidden Markov Model is stored.

Primary: true
Home: http://pfam.xfam.org/
Institution: European Bioinformatics Institute, Hinxton, Cambridge
Location: UK
Example: http://identifiers.org/pfam:PF01234
Uptime: 100%

CryptoDB is one of the databases that can be accessed through the EuPathDB (http://EuPathDB.org; formerly ApiDB) portal, covering eukaryotic pathogens of the genera Cryptosporidium, Giardia, Leishmania, Neospora, Plasmodium, Toxoplasma, Trichomonas and Trypanosoma. While each of these groups is supported by a taxon-specific database built upon the same infrastructure, the EuPathDB portal offers an entry point to all these resources, and the opportunity to leverage orthology for searches across genera.

URI: http://identifiers.org/cryptodb
Identifier pattern: ^\w+
Example: http://identifiers.org/cryptodb:cgd7_230

CryptoDB is one of the databases that can be accessed through the EuPathDB (http://EuPathDB.org; formerly ApiDB) portal, covering eukaryotic pathogens of the genera Cryptosporidium, Giardia, Leishmania, Neospora, Plasmodium, Toxoplasma, Trichomonas and Trypanosoma. While each of these groups is supported by a taxon-specific database built upon the same infrastructure, the EuPathDB portal offers an entry point to all these resources, and the opportunity to leverage orthology for searches across genera.

Home: http://cryptodb.org/cryptodb/
Institution: Center for Tropical & Emerging Global Diseases, University of Georgia
Location: USA
Example: http://identifiers.org/cryptodb:cgd7_230
Uptime: 76%

The International Nucleotide Sequence Database Collaboration (INSDC) consists of a joint effort to collect and disseminate databases containing DNA and RNA sequences.

Synonyms: International Nucleotide Sequence Database Collaboration
URI: http://identifiers.org/insdc
Identifier pattern: ^([A-Z]\d{5}|[A-Z]{2}\d{6}|[A-Z]{4}\d{8}|[A-J][A-Z]{2}\d{5})(\.\d+)?$
Example: http://identifiers.org/insdc:X58356

The International Nucleotide Sequence Database Collaboration (INSDC) consists of a joint effort to collect and disseminate databases containing DNA and RNA sequences.

Home: http://www.ncbi.nlm.nih.gov/Genbank/
Institution: National Center for Biotechnology Information (NCBI)
Location: USA
Example: http://identifiers.org/insdc:X58356
Uptime: 100%

The International Nucleotide Sequence Database Collaboration (INSDC) consists of a joint effort to collect and disseminate databases containing DNA and RNA sequences.

Home: http://www.ddbj.nig.ac.jp/
Institution: DNA Data Bank of Japan, Mishima, Shizuoka
Location: Japan
Example: http://identifiers.org/insdc:X58356
Uptime: 97%

The International Nucleotide Sequence Database Collaboration (INSDC) consists of a joint effort to collect and disseminate databases containing DNA and RNA sequences.

Home: http://www.ebi.ac.uk/ena/
Institution: European Bioinformatics Institute, Hinxton, Cambridge
Location: UK
Example: http://identifiers.org/insdc:X58356
Uptime: 99%

The International Nucleotide Sequence Database Collaboration (INSDC) consists of a joint effort to collect and disseminate databases containing DNA and RNA sequences.

Home: http://www.ncbi.nlm.nih.gov/nuccore/
Institution: National Center for Biotechnology Information (NCBI)
Location: USA
Example: http://identifiers.org/insdc:X58356
Uptime: 100%

The Pseudomonas Genome Database is a resource for peer-reviewed, continually updated annotation for all Pseudomonas species. It includes gene and protein sequence information, as well as regulation and predicted function and annotation.

Synonyms: PGD
URI: http://identifiers.org/pseudomonas
Identifier pattern: ^P\w+$
Example: http://identifiers.org/pseudomonas:PSEEN0001

The Pseudomonas Genome Database is a resource for peer-reviewed, continually updated annotation for all Pseudomonas species. It includes gene and protein sequence information, as well as regulation and predicted function and annotation.

Home: http://www.pseudomonas.com/
Institution: Simon Fraser University, British Columbia
Location: Canada
Example: http://identifiers.org/pseudomonas:PSEEN0001
Uptime: 78%