1454 results found.

   Integrated Microbial Genomes Taxon at Lawrence Berkeley National Laboratory  
The integrated microbial genomes (IMG) system is a data management, analysis and annotation platform for all publicly available genomes. IMG contains ...
The integrated microbial genomes (IMG) system is a data management, analysis and annotation platform for all publicly available genomes. IMG contains both draft and complete JGI (DoE Joint Genome Institute) microbial genomes integrated with all other publicly available genomes from all three domains of life, together with a large number of plasmids and viruses. This datatype refers to taxon information.

Home: http://img.jgi.doe.gov/
Institution: Lawrence Berkeley National Laboratory, Berkeley
Location: USA
Example: http://identifiers.org/img.taxon:648028003
Uptime: 94%
   COGs   [Namespace: cogs]  
Clusters of Orthologous Groups of proteins (COGs) were delineated by comparing protein sequences encoded in complete genomes, representing major phylo...
Clusters of Orthologous Groups of proteins (COGs) were delineated by comparing protein sequences encoded in complete genomes, representing major phylogenetic lineages. Each COG consists of individual proteins or groups of paralogs from at least 3 lineages and thus corresponds to an ancient conserved domain.

Synonyms: Clusters of Orthologous Groups
URI: http://identifiers.org/cogs
Identifier pattern: ^COG\d+$
Example: http://identifiers.org/cogs:COG0001
   COGs at NCBI   [Provider code: ncbi]   
Clusters of Orthologous Groups of proteins (COGs) were delineated by comparing protein sequences encoded in complete genomes, representing major phylo...
Clusters of Orthologous Groups of proteins (COGs) were delineated by comparing protein sequences encoded in complete genomes, representing major phylogenetic lineages. Each COG consists of individual proteins or groups of paralogs from at least 3 lineages and thus corresponds to an ancient conserved domain.

Home: http://www.ncbi.nlm.nih.gov/COG/
Institution: National Center for Biotechnology Information (NCBI)
Location: USA
Example: http://identifiers.org/cogs:COG0001
Uptime: 74%
   MEROPS   [Namespace: merops]  
The MEROPS database is an information resource for peptidases (also termed proteases, proteinases and proteolytic enzymes) and the proteins that inhib...
The MEROPS database is an information resource for peptidases (also termed proteases, proteinases and proteolytic enzymes) and the proteins that inhibit them.

URI: http://identifiers.org/merops
Identifier pattern: ^[SCTAGMNU]\d{2}\.([AB]\d{2}|\d{3})$
Example: http://identifiers.org/merops:S01.001
   MEROPS database at Sanger Institute  
The MEROPS database is an information resource for peptidases (also termed proteases, proteinases and proteolytic enzymes) and the proteins that inhib...
The MEROPS database is an information resource for peptidases (also termed proteases, proteinases and proteolytic enzymes) and the proteins that inhibit them.

Home: http://merops.sanger.ac.uk/index.htm
Institution: Wellcome Trust Sanger Institute
Location: United Kingdom
Example: http://identifiers.org/merops:S01.001
Uptime: 90%
   Plant Genome Network   [Namespace: pgn]  
The Plant Genome Network (PGN) is a resource for the storage, retrieval and annotation of plant ESTs, with a focus on comparative genomics. All data a...
The Plant Genome Network (PGN) is a resource for the storage, retrieval and annotation of plant ESTs, with a focus on comparative genomics. All data are directly derived from chromatograms with original and intermediate data stored in the database.

URI: http://identifiers.org/pgn
Identifier pattern: ^\d+$
Example: http://identifiers.org/pgn:196828
   PGN at Cornell University  
The Plant Genome Network (PGN) is a resource for the storage, retrieval and annotation of plant ESTs, with a focus on comparative genomics. All data a...
The Plant Genome Network (PGN) is a resource for the storage, retrieval and annotation of plant ESTs, with a focus on comparative genomics. All data are directly derived from chromatograms with original and intermediate data stored in the database.

Home: http://pgn.cornell.edu/
Institution: Cornell University, Ithaca, New York
Location: USA
Example: http://identifiers.org/pgn:196828
Uptime: 69%
   HOMD Sequence Metainformation   [Namespace: homd.seq]  
The Human Oral Microbiome Database (HOMD) provides a site-specific comprehensive database for the more than 600 prokaryote species that are present in...
The Human Oral Microbiome Database (HOMD) provides a site-specific comprehensive database for the more than 600 prokaryote species that are present in the human oral cavity. It contains genomic information based on a curated 16S rRNA gene-based provisional naming scheme, and taxonomic information. This datatype contains genomic sequence information.

Synonyms: Human Oral Microbiome Database
URI: http://identifiers.org/homd.seq
Identifier pattern: ^SEQF\d+$
Example: http://identifiers.org/homd.seq:SEQF1003
   HOMD sequence metainformation at The Forsyth Institute  
The Human Oral Microbiome Database (HOMD) provides a site-specific comprehensive database for the more than 600 prokaryote species that are present in...
The Human Oral Microbiome Database (HOMD) provides a site-specific comprehensive database for the more than 600 prokaryote species that are present in the human oral cavity. It contains genomic information based on a curated 16S rRNA gene-based provisional naming scheme, and taxonomic information. This datatype contains genomic sequence information.

Home: http://www.homd.org/index.php
Institution: The Forsyth Institute, Boston
Location: USA
Example: http://identifiers.org/homd.seq:SEQF1003
Uptime: 100%
   SoyBase   [Namespace: soybase]  
SoyBase is a repository for curated genetics, genomics and related data resources for soybean.
SoyBase is a repository for curated genetics, genomics and related data resources for soybean.

URI: http://identifiers.org/soybase
Identifier pattern: ^\w+(\-)?\w+(\-)?\w+$
Example: http://identifiers.org/soybase:BARC-013845-01256
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