1519 results found.

   Pfam   [Namespace: pfam]  
The Pfam database contains information about protein domains and families. For each entry a protein sequence alignment and a Hidden Markov Model is st...
The Pfam database contains information about protein domains and families. For each entry a protein sequence alignment and a Hidden Markov Model is stored.

Synonyms: Protein Family Database
URI: http://identifiers.org/pfam
Identifier pattern: ^PF\d{5}$
Example: http://identifiers.org/pfam:PF01234
   Pfam at EMBL-EBI   [Provider code: ebi]   
The Pfam database contains information about protein domains and families. For each entry a protein sequence alignment and a Hidden Markov Model is st...
The Pfam database contains information about protein domains and families. For each entry a protein sequence alignment and a Hidden Markov Model is stored.

Primary: true
Home: https://pfam.xfam.org/
Institution: European Bioinformatics Institute, Hinxton, Cambridge
Location: UK
Example: http://identifiers.org/pfam:PF01234
Uptime: 100%
   CryptoDB   [Namespace: cryptodb]  
CryptoDB is one of the databases that can be accessed through the EuPathDB (http://EuPathDB.org; formerly ApiDB) portal, covering eukaryotic pathogens...
CryptoDB is one of the databases that can be accessed through the EuPathDB (http://EuPathDB.org; formerly ApiDB) portal, covering eukaryotic pathogens of the genera Cryptosporidium, Giardia, Leishmania, Neospora, Plasmodium, Toxoplasma, Trichomonas and Trypanosoma. While each of these groups is supported by a taxon-specific database built upon the same infrastructure, the EuPathDB portal offers an entry point to all these resources, and the opportunity to leverage orthology for searches across genera.

URI: http://identifiers.org/cryptodb
Identifier pattern: ^\w+
Example: http://identifiers.org/cryptodb:cgd7_230
   CryptoDB at EuPathDB  
CryptoDB is one of the databases that can be accessed through the EuPathDB (http://EuPathDB.org; formerly ApiDB) portal, covering eukaryotic pathogens...
CryptoDB is one of the databases that can be accessed through the EuPathDB (http://EuPathDB.org; formerly ApiDB) portal, covering eukaryotic pathogens of the genera Cryptosporidium, Giardia, Leishmania, Neospora, Plasmodium, Toxoplasma, Trichomonas and Trypanosoma. While each of these groups is supported by a taxon-specific database built upon the same infrastructure, the EuPathDB portal offers an entry point to all these resources, and the opportunity to leverage orthology for searches across genera.

Home: http://cryptodb.org/cryptodb/
Institution: Center for Tropical & Emerging Global Diseases, University of Georgia
Location: USA
Example: http://identifiers.org/cryptodb:cgd7_230
Uptime: 71%
   Nucleotide Sequence Database   [Namespace: insdc]  
The International Nucleotide Sequence Database Collaboration (INSDC) consists of a joint effort to collect and disseminate databases containing DNA an...
The International Nucleotide Sequence Database Collaboration (INSDC) consists of a joint effort to collect and disseminate databases containing DNA and RNA sequences.

Synonyms: International Nucleotide Sequence Database Collaboration
URI: http://identifiers.org/insdc
Identifier pattern: ^([A-Z]\d{5}|[A-Z]{2}\d{6}|[A-Z]{4}\d{8}|[A-J][A-Z]{2}\d{5})(\.\d+)?$
Example: http://identifiers.org/insdc:X58356
   INSDC through GenBank  
The International Nucleotide Sequence Database Collaboration (INSDC) consists of a joint effort to collect and disseminate databases containing DNA an...
The International Nucleotide Sequence Database Collaboration (INSDC) consists of a joint effort to collect and disseminate databases containing DNA and RNA sequences.

Home: https://www.ncbi.nlm.nih.gov/Genbank/
Institution: National Center for Biotechnology Information (NCBI)
Location: USA
Example: http://identifiers.org/insdc:X58356
Uptime: 100%
   INSDC through DDBJ  
The International Nucleotide Sequence Database Collaboration (INSDC) consists of a joint effort to collect and disseminate databases containing DNA an...
The International Nucleotide Sequence Database Collaboration (INSDC) consists of a joint effort to collect and disseminate databases containing DNA and RNA sequences.

Home: http://www.ddbj.nig.ac.jp/
Institution: DNA Data Bank of Japan, Mishima, Shizuoka
Location: Japan
Example: http://identifiers.org/insdc:X58356
Uptime: 97%
   INSDC through European Nucleotide Archive (ENA)   [Provider code: ebi]   
The International Nucleotide Sequence Database Collaboration (INSDC) consists of a joint effort to collect and disseminate databases containing DNA an...
The International Nucleotide Sequence Database Collaboration (INSDC) consists of a joint effort to collect and disseminate databases containing DNA and RNA sequences.

Home: https://www.ebi.ac.uk/ena/
Institution: European Bioinformatics Institute, Hinxton, Cambridge
Location: UK
Example: http://identifiers.org/insdc:X58356
Uptime: 99%
   INSDC through Nucleotide database at NCBI   [Provider code: ncbi]   
The International Nucleotide Sequence Database Collaboration (INSDC) consists of a joint effort to collect and disseminate databases containing DNA an...
The International Nucleotide Sequence Database Collaboration (INSDC) consists of a joint effort to collect and disseminate databases containing DNA and RNA sequences.

Home: https://www.ncbi.nlm.nih.gov/nuccore/
Institution: National Center for Biotechnology Information (NCBI)
Location: USA
Example: http://identifiers.org/insdc:X58356
Uptime: 100%
   Pseudomonas Genome Database   [Namespace: pseudomonas]  
The Pseudomonas Genome Database is a resource for peer-reviewed, continually updated annotation for all Pseudomonas species. It includes gene and prot...
The Pseudomonas Genome Database is a resource for peer-reviewed, continually updated annotation for all Pseudomonas species. It includes gene and protein sequence information, as well as regulation and predicted function and annotation.

Synonyms: PGD
URI: http://identifiers.org/pseudomonas
Identifier pattern: ^P\w+$
Example: http://identifiers.org/pseudomonas:PSEEN0001
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