19 results found.

   RNAcentral through EMBL-EBI  
RNAcentral is a public resource that offers integrated access to a comprehensive and up-to-date set of non-coding RNA sequences provided by a collabor...
RNAcentral is a public resource that offers integrated access to a comprehensive and up-to-date set of non-coding RNA sequences provided by a collaborating group of Expert Databases.

Home: http://rnacentral.org/
Institution: European Bioinformatics Institute, Hinxton, Cambridge
Location: UK
Example: http://identifiers.org/rnacentral:URS0000759CF4
Uptime: 0%
   Rfam at EMBL-EBI   [Provider code: ebi]   
The Rfam database is a collection of RNA families, each represented by multiple sequence alignments, consensus secondary structures and covariance mod...
The Rfam database is a collection of RNA families, each represented by multiple sequence alignments, consensus secondary structures and covariance models (CMs). The families in Rfam break down into three broad functional classes: non-coding RNA genes, structured cis-regulatory elements and self-splicing RNAs. Typically these functional RNAs often have a conserved secondary structure which may be better preserved than the RNA sequence. The CMs used to describe each family are a slightly more complicated relative of the profile hidden Markov models (HMMs) used by Pfam. CMs can simultaneously model RNA sequence and the structure in an elegant and accurate fashion.

Primary: true
Home: http://rfam.xfam.org/
Institution: European Bioinformatics Institute, Hinxton, Cambridge
Location: UK
Example: http://identifiers.org/rfam:RF00230
Uptime: 84%
   Vectorbase at EMBL-EBI   [Provider code: ebi]   
VectorBase is an NIAID-funded Bioinformatic Resource Center focused on invertebrate vectors of human pathogens. VectorBase annotates and curates vecto...
VectorBase is an NIAID-funded Bioinformatic Resource Center focused on invertebrate vectors of human pathogens. VectorBase annotates and curates vector genomes providing a web accessible integrated resource for the research community. Currently, VectorBase contains genome information for three mosquito species: Aedes aegypti, Anopheles gambiae and Culex quinquefasciatus, a body louse Pediculus humanus and a tick species Ixodes scapularis.

Primary: true
Home: http://www.vectorbase.org/
Institution: European Bioinformatics Institute, Hinxton, Cambridge
Location: UK
Example: http://identifiers.org/vectorbase:ISCW007415
Uptime: 42%
   ELM at EMBL (Germany)  
Linear motifs are short, evolutionarily plastic components of regulatory proteins. Mainly focused on the eukaryotic sequences,the Eukaryotic Linear Mo...
Linear motifs are short, evolutionarily plastic components of regulatory proteins. Mainly focused on the eukaryotic sequences,the Eukaryotic Linear Motif resource (ELM) is a database of curated motif classes and instances.

Home: http://elm.eu.org/
Institution: Structural and Computational Biology, European Molecular Biology Laboratory, Heidelberg
Location: Germany
Example: http://identifiers.org/elm:CLV_MEL_PAP_1
Uptime: 99%
   BioCatalogue at EMBL-EBI   [Provider code: ebi]   
The BioCatalogue provides a common interface for registering, browsing and annotating Web Services to the Life Science community. Registered services ...
The BioCatalogue provides a common interface for registering, browsing and annotating Web Services to the Life Science community. Registered services are monitored, allowing the identification of service problems and changes and the filtering-out of unavailable or unreliable resources. BioCatalogue is free to use, for all.

Home: http://www.biocatalogue.org/
Institution: European Bioinformatics Institute, Hinxton, Cambridge
Location: UK
Example: http://identifiers.org/biocatalogue.service:614
Uptime: 94%
   Pfam at EMBL-EBI   [Provider code: ebi]   
The Pfam database contains information about protein domains and families. For each entry a protein sequence alignment and a Hidden Markov Model is st...
The Pfam database contains information about protein domains and families. For each entry a protein sequence alignment and a Hidden Markov Model is stored.

Primary: true
Home: http://pfam.xfam.org/
Institution: European Bioinformatics Institute, Hinxton, Cambridge
Location: UK
Example: http://identifiers.org/pfam:PF01234
Uptime: 100%
   Enzyme Portal through EMBL-EBI   [Provider code: enzymeportal]   
The Enzyme Classification contains the recommendations of the Nomenclature Committee of the International Union of Biochemistry and Molecular Biology ...
The Enzyme Classification contains the recommendations of the Nomenclature Committee of the International Union of Biochemistry and Molecular Biology on the nomenclature and classification of enzyme-catalysed reactions.

Home: https://www.ebi.ac.uk/enzymeportal
Institution: Enzyme Portal at European Bioinformatics Institute, Hinxton, Cambridge
Location: UK
Example: http://identifiers.org/ec-code:1.1.1.1
Uptime: 0%
   SIDER Drug v2 at EMBL (Heidelberg)  
SIDER (Side Effect Resource) is a public, computer-readable side effect resource that connects drugs to side effect terms. It aggregates dispersed pub...
SIDER (Side Effect Resource) is a public, computer-readable side effect resource that connects drugs to side effect terms. It aggregates dispersed public information on side effects. This collection references drugs in SIDER.

Home: http://sideeffects.embl.de/
Institution: Structural and Computational Biology Unit, European Molecular Biology Laboratory, Heidelberg
Location: Germany
Example: http://identifiers.org/sider.drug:2244
Uptime: 100%
   SIDER Side Effect v2 at EMBL (Heidelberg)  
SIDER (Side Effect Resource) is a public, computer-readable side effect resource that connects drugs to side effect terms. It aggregates dispersed pub...
SIDER (Side Effect Resource) is a public, computer-readable side effect resource that connects drugs to side effect terms. It aggregates dispersed public information on side effects. This collection references side effects of drugs as referenced in SIDER.

Home: http://sideeffects.embl.de/
Institution: Structural and Computational Biology Unit, European Molecular Biology Laboratory, Heidelberg
Location: Germany
Example: http://identifiers.org/sider.effect:C0017565
Uptime: 100%
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