53 results found.

   Protein Data Bank Japan (PDBj)   [Provider code: pdbj]   
The Protein Data Bank is the single worldwide archive of structural data of biological macromolecules.
The Protein Data Bank is the single worldwide archive of structural data of biological macromolecules.

Home: http://www.pdbj.org/
Institution: Institute for Protein Research, Osaka University
Location: Japan
Example: http://identifiers.org/pdb:2gc4
Uptime: 95%
   INSDC CDS through DDBJ  
The coding sequence or protein identifiers as maintained in INSDC.
The coding sequence or protein identifiers as maintained in INSDC.

Home: http://getentry.ddbj.nig.ac.jp
Institution: DNA Data Bank of Japan, Mishima, Shizuoka
Location: Japan
Example: http://identifiers.org/insdc.cds:AAA35559
Uptime: 97%
   DDBJ Sequence Read Archive (DRA)  
The Sequence Read Archive (SRA) stores raw sequencing data from the next generation of sequencing platforms Data submitted to SRA. It is organized usi...
The Sequence Read Archive (SRA) stores raw sequencing data from the next generation of sequencing platforms Data submitted to SRA. It is organized using a metadata model consisting of six objects: study, sample, experiment, run, analysis and submission. The SRA study contains high-level information including goals of the study and literature references, and may be linked to the INSDC BioProject database.

Home: http://trace.ddbj.nig.ac.jp/dra/
Institution: DNA Data Bank of Japan, Mishima, Shizuoka
Location: Japan
Example: http://identifiers.org/insdc.sra:SRX000007
Uptime: 97%
   INSDC through DDBJ  
The International Nucleotide Sequence Database Collaboration (INSDC) consists of a joint effort to collect and disseminate databases containing DNA an...
The International Nucleotide Sequence Database Collaboration (INSDC) consists of a joint effort to collect and disseminate databases containing DNA and RNA sequences.

Home: http://www.ddbj.nig.ac.jp/
Institution: DNA Data Bank of Japan, Mishima, Shizuoka
Location: Japan
Example: http://identifiers.org/insdc:X58356
Uptime: 97%
   Oryzabase v4 Strain at National Institute of Genetics (Japan)  
Oryzabase provides a view of rice (Oryza sativa) as a model monocot plant by integrating biological data with molecular genomic information. It contai...
Oryzabase provides a view of rice (Oryza sativa) as a model monocot plant by integrating biological data with molecular genomic information. It contains information about rice development and anatomy, rice mutants, and genetic resources, especially for wild varieties of rice. Developmental and anatomical descriptions include in situ gene expression data serving as stage and tissue markers. This collection references wild strain information.

Home: http://www.shigen.nig.ac.jp/rice/oryzabaseV4/
Institution: Genetic Strains Research Center, National Institute of Genetics, Mishima, Shizuoka
Location: Japan
Example: http://identifiers.org/oryzabase.strain:1
Uptime: 99%
   Oryzabase v4 Stage at National Institute of Genetics (Japan)  
Oryzabase provides a view of rice (Oryza sativa) as a model monocot plant by integrating biological data with molecular genomic information. It contai...
Oryzabase provides a view of rice (Oryza sativa) as a model monocot plant by integrating biological data with molecular genomic information. It contains information about rice development and anatomy, rice mutants, and genetic resources, especially for wild varieties of rice. Developmental and anatomical descriptions include in situ gene expression data serving as stage and tissue markers. This collection references development stage information.

Home: http://www.shigen.nig.ac.jp/rice/oryzabaseV4/
Institution: Genetic Strains Research Center, National Institute of Genetics, Mishima, Shizuoka
Location: Japan
Example: http://identifiers.org/oryzabase.stage:34
Uptime: 99%
   Oryzabase v4 Gene at National Institute of Genetics (Japan)  
Oryzabase provides a view of rice (Oryza sativa) as a model monocot plant by integrating biological data with molecular genomic information. It contai...
Oryzabase provides a view of rice (Oryza sativa) as a model monocot plant by integrating biological data with molecular genomic information. It contains information about rice development and anatomy, rice mutants, and genetic resources, especially for wild varieties of rice. Developmental and anatomical descriptions include in situ gene expression data serving as stage and tissue markers. This collection references gene information.

Home: http://www.shigen.nig.ac.jp/rice/oryzabaseV4/
Institution: Genetic Strains Research Center, National Institute of Genetics, Mishima, Shizuoka
Location: Japan
Example: http://identifiers.org/oryzabase.gene:117
Uptime: 99%
   Oryzabase v4 Mutant at National Institute of Genetics (Japan)  
Oryzabase provides a view of rice (Oryza sativa) as a model monocot plant by integrating biological data with molecular genomic information. It contai...
Oryzabase provides a view of rice (Oryza sativa) as a model monocot plant by integrating biological data with molecular genomic information. It contains information about rice development and anatomy, rice mutants, and genetic resources, especially for wild varieties of rice. Developmental and anatomical descriptions include in situ gene expression data serving as stage and tissue markers. This collection references mutant strain information.

Home: http://www.shigen.nig.ac.jp/rice/oryzabaseV4/
Institution: Genetic Strains Research Center, National Institute of Genetics, Mishima, Shizuoka
Location: Japan
Example: http://identifiers.org/oryzabase.mutant:21393
Uptime: 99%
   BioSample   [Namespace: biosample]  
The BioSample Database stores information about biological samples used in molecular experiments, such as sequencing, gene expression or proteomics. I...
The BioSample Database stores information about biological samples used in molecular experiments, such as sequencing, gene expression or proteomics. It includes reference samples, such as cell lines, which are repeatedly used in experiments. Accession numbers for the reference samples will be exchanged with a similar database at NCBI, and DDBJ (Japan). Record access may be affected due to different release cycles and inter-institutional synchronisation.

Synonyms: BioSDe
URI: http://identifiers.org/biosample
Identifier pattern: ^SAM[NED](\w)?\d+$
Example: http://identifiers.org/biosample:SAMEA2397676
   BioSample Database at EBI   [Provider code: ebi]   
The BioSample Database stores information about biological samples used in molecular experiments, such as sequencing, gene expression or proteomics. I...
The BioSample Database stores information about biological samples used in molecular experiments, such as sequencing, gene expression or proteomics. It includes reference samples, such as cell lines, which are repeatedly used in experiments. Accession numbers for the reference samples will be exchanged with a similar database at NCBI, and DDBJ (Japan). Record access may be affected due to different release cycles and inter-institutional synchronisation.

Primary: true
Home: http://www.ebi.ac.uk/biosamples/
Institution: European Bioinformatics Institute, Hinxton, Cambridge
Location: UK
Example: http://identifiers.org/biosample:SAMEA2397676
Uptime: 98%
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