Registry

48 results found.

   Transport Classification Database   [Namespace: tcdb]  
The database details a comprehensive IUBMB approved classification system for membrane transport proteins known as the Transporter Classification (TC...
The database details a comprehensive IUBMB approved classification system for membrane transport proteins known as the Transporter Classification (TC) system. The TC system is analogous to the Enzyme Commission (EC) system for classification of enzymes, but incorporates phylogenetic information additionally.

Synonyms: TCDB
URI: http://identifiers.org/tcdb
Identifier pattern: ^\d+\.[A-Z]\.\d+\.\d+\.\d+$
Example: http://identifiers.org/tcdb/5.A.1.1.1
   TCDB  
The database details a comprehensive IUBMB approved classification system for membrane transport proteins known as the Transporter Classification (TC...
The database details a comprehensive IUBMB approved classification system for membrane transport proteins known as the Transporter Classification (TC) system. The TC system is analogous to the Enzyme Commission (EC) system for classification of enzymes, but incorporates phylogenetic information additionally.

Home: http://www.tcdb.org/
Institution: Division of Biological Sciences, UCSD
Location: USA
Example: http://identifiers.org/tcdb/5.A.1.1.1
Uptime: 100%
   CAZy   [Namespace: cazy]  
The Carbohydrate-Active Enzyme (CAZy) database is a resource specialized in enzymes that build and breakdown complex carbohydrates and glycoconjugates...
The Carbohydrate-Active Enzyme (CAZy) database is a resource specialized in enzymes that build and breakdown complex carbohydrates and glycoconjugates. These enzymes are classified into families based on structural features.

Synonyms: Carbohydrate-Active enzYmes
URI: http://identifiers.org/cazy
Identifier pattern: ^(GT|GH|PL|CE|CBM)\d+(\_\d+)?$
Example: http://identifiers.org/cazy/GT10
   CAZy at CNRS  
The Carbohydrate-Active Enzyme (CAZy) database is a resource specialized in enzymes that build and breakdown complex carbohydrates and glycoconjugates...
The Carbohydrate-Active Enzyme (CAZy) database is a resource specialized in enzymes that build and breakdown complex carbohydrates and glycoconjugates. These enzymes are classified into families based on structural features.

Home: http://www.cazy.org/
Institution: Architecture et Fonction des Macromolécules Biologiques, CNRS, Marseille
Location: France
Example: http://identifiers.org/cazy/GT10
Uptime: 100%
   CharProt   [Namespace: charprot]  
CharProt is a database of biochemically characterized proteins designed to support automated annotation pipelines. Entries are annotated with gene nam...
CharProt is a database of biochemically characterized proteins designed to support automated annotation pipelines. Entries are annotated with gene name, symbol and various controlled vocabulary terms, including Gene Ontology terms, Enzyme Commission number and TransportDB accession.

URI: http://identifiers.org/charprot
Identifier pattern: ^CH_\d+$
Example: http://identifiers.org/charprot/CH_001923
   CharProt at JCVI  
CharProt is a database of biochemically characterized proteins designed to support automated annotation pipelines. Entries are annotated with gene nam...
CharProt is a database of biochemically characterized proteins designed to support automated annotation pipelines. Entries are annotated with gene name, symbol and various controlled vocabulary terms, including Gene Ontology terms, Enzyme Commission number and TransportDB accession.

Home: http://www.jcvi.org/charprotdb
Institution: J Craig Venter institute, Rockville, Maryland
Location: USA
Example: http://identifiers.org/charprot/CH_001923
Uptime: 95%
   Rhea   [Namespace: rhea]  
Rhea is a manually annotated reaction database, where all reaction participants (reactants and products) are linked to the ChEBI database (Chemical En...
Rhea is a manually annotated reaction database, where all reaction participants (reactants and products) are linked to the ChEBI database (Chemical Entities of Biological Interest), providing detailed information about structure, formulae and charge. It is populated with the reactions found in the EC list, IntEnz and ENZYME databases), as well as other biochemical reactions, including those that are often termed "spontaneous".

URI: http://identifiers.org/rhea
Identifier pattern: ^\d{5}$
Example: http://identifiers.org/rhea/12345
   Rhea  
Rhea is a manually annotated reaction database, where all reaction participants (reactants and products) are linked to the ChEBI database (Chemical En...
Rhea is a manually annotated reaction database, where all reaction participants (reactants and products) are linked to the ChEBI database (Chemical Entities of Biological Interest), providing detailed information about structure, formulae and charge. It is populated with the reactions found in the EC list, IntEnz and ENZYME databases), as well as other biochemical reactions, including those that are often termed "spontaneous".

Primary: true
Home: http://www.rhea-db.org/
Institution: European Bioinformatics Institute and Swiss Institute of Bioinformatics
Location: UK
Example: http://identifiers.org/rhea/12345
Uptime: 99%
   UM-BBD Compound   [Namespace: umbbd.compound]  
The University of Minnesota Biocatalysis/Biodegradation Database (UM-BBD) contains information on microbial biocatalytic reactions and biodegradation ...
The University of Minnesota Biocatalysis/Biodegradation Database (UM-BBD) contains information on microbial biocatalytic reactions and biodegradation pathways for primarily xenobiotic, chemical compounds. The goal of the UM-BBD is to provide information on microbial enzyme-catalyzed reactions that are important for biotechnology. This collection refers to compound information.

Synonyms: University of Minnesota Biocatalysis/Biodegradation Database (Compound)
URI: http://identifiers.org/umbbd.compound
Identifier pattern: ^c\d+$
Example: http://identifiers.org/umbbd.compound/c0001
   Biocatalysis/Biodegradation Database Mirror (Compound) at ETH Zurich  
The University of Minnesota Biocatalysis/Biodegradation Database (UM-BBD) contains information on microbial biocatalytic reactions and biodegradation ...
The University of Minnesota Biocatalysis/Biodegradation Database (UM-BBD) contains information on microbial biocatalytic reactions and biodegradation pathways for primarily xenobiotic, chemical compounds. The goal of the UM-BBD is to provide information on microbial enzyme-catalyzed reactions that are important for biotechnology. This collection refers to compound information.

Home: http://umbbd.ethz.ch/
Institution: ETH, Zurich
Location: Switzerland
Example: http://identifiers.org/umbbd.compound/c0001
Uptime: 100%
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