177 results found.

   Gramene Growth Stage Ontology   [Namespace: gramene.growthstage]  
Gramene is a comparative genome mapping database for grasses and crop plants. It combines a semi-automatically generated database of cereal genomic an...
Gramene is a comparative genome mapping database for grasses and crop plants. It combines a semi-automatically generated database of cereal genomic and expressed sequence tag sequences, genetic maps, map relations, quantitative trait loci (QTL), and publications, with a curated database of mutants (genes and alleles), molecular markers, and proteins. This collection refers to growth stage ontology information in Gramene.

URI: http://identifiers.org/gramene.growthstage
Identifier pattern: ^GRO\:\d+$
Example: http://identifiers.org/GRO:0007133
   Human Phenotype Ontology   [Namespace: hp]  
The Human Phenotype Ontology (HPO) aims to provide a standardized vocabulary of phenotypic abnormalities encountered in human disease. Each term in th...
The Human Phenotype Ontology (HPO) aims to provide a standardized vocabulary of phenotypic abnormalities encountered in human disease. Each term in the HPO describes a phenotypic abnormality, such as atrial septal defect. The HPO is currently being developed using the medical literature, Orphanet, DECIPHER, and OMIM.

Synonyms: HPO
URI: http://identifiers.org/hp
Identifier pattern: ^HP:\d{7}$
Example: http://identifiers.org/HP:0000118
   Information Artifact Ontology   [Namespace: iao]  
An ontology of information entities, originally driven by work by the Ontology of Biomedical Investigation (OBI) digital entity and realizable informa...
An ontology of information entities, originally driven by work by the Ontology of Biomedical Investigation (OBI) digital entity and realizable information entity branch.

URI: http://identifiers.org/iao
Identifier pattern: ^\d{7}$
Example: http://identifiers.org/iao:0000030
   Mammalian Phenotype Ontology through OLS   [Provider code: ols]   
The Mammalian Phenotype Ontology (MP) classifies and organises phenotypic information related to the mouse and other mammalian species. This ontology ...
The Mammalian Phenotype Ontology (MP) classifies and organises phenotypic information related to the mouse and other mammalian species. This ontology has been applied to mouse phenotype descriptions in various databases allowing comparisons of data from diverse mammalian sources. It can facilitate in the identification of appropriate experimental disease models, and aid in the discovery of candidate disease genes and molecular signaling pathways.

Home: https://www.ebi.ac.uk/ols/ontologies/mp/
Institution: European Bioinformatics Institute, Hinxton, Cambridge
Location: UK
Example: http://identifiers.org/MP:0005452
Uptime: 99%
   PATO through BioPortal   [Provider code: bptl]   
PATO is an ontology of phenotypic qualities, intended for use in a number of applications, primarily defining composite phenotypes and phenotype anno...
PATO is an ontology of phenotypic qualities, intended for use in a number of applications, primarily defining composite phenotypes and phenotype annotation.

Home: http://bioportal.bioontology.org/ontologies/PATO
Institution: National Center for Biomedical Ontology, Stanford
Location: USA
Example: http://identifiers.org/PATO:0001998
Uptime: 96%
   Ontology of Physics for Biology   [Namespace: opb]  
The OPB is a reference ontology of classical physics as applied to the dynamics of biological systems. It is designed to encompass the multiple struct...
The OPB is a reference ontology of classical physics as applied to the dynamics of biological systems. It is designed to encompass the multiple structural scales (multiscale atoms to organisms) and multiple physical domains (multidomain fluid dynamics, chemical kinetics, particle diffusion, etc.) that are encountered in the study and analysis of biological organisms.

Synonyms: OPB
URI: http://identifiers.org/opb
Identifier pattern: ^OPB_\d+$
Example: http://identifiers.org/opb:OPB_00573
   Pathway Ontology at Rat Genome Database  
The Pathway Ontology captures information on biological networks, the relationships between netweorks and the alterations or malfunctioning of such ne...
The Pathway Ontology captures information on biological networks, the relationships between netweorks and the alterations or malfunctioning of such networks within a hierarchical structure. The five main branches of the ontology are: classic metabolic pathways, regulatory, signaling, drug, and disease pathwaysfor complex human conditions.

Home: http://rgd.mcw.edu/rgdweb/ontology/search.html
Institution: Medical College of Wisconsin, Wisconsin
Location: USA
Example: http://identifiers.org/PW:0000208
Uptime: 100%
   SBO through BioPortal   [Provider code: bptl]   
The goal of the Systems Biology Ontology is to develop controlled vocabularies and ontologies tailored specifically for the kinds of problems being fa...
The goal of the Systems Biology Ontology is to develop controlled vocabularies and ontologies tailored specifically for the kinds of problems being faced in Systems Biology, especially in the context of computational modeling. SBO is a project of the BioModels.net effort.

Home: http://bioportal.bioontology.org/ontologies/SBO
Institution: National Center for Biomedical Ontology, Stanford
Location: USA
Example: http://identifiers.org/SBO:0000262
Uptime: 89%
   Molecular Interactions Ontology through OLS   [Provider code: ols]   
The Molecular Interactions (MI) ontology forms a structured controlled vocabulary for the annotation of experiments concerned with protein-protein int...
The Molecular Interactions (MI) ontology forms a structured controlled vocabulary for the annotation of experiments concerned with protein-protein interactions. MI is developed by the HUPO Proteomics Standards Initiative.

Home: https://www.ebi.ac.uk/ols/ontologies/mi
Institution: European Bioinformatics Institute, Hinxton, Cambridge
Location: UK
Example: http://identifiers.org/MI:0308
Uptime: 99%
   Ontology for Biomedical Investigations   [Namespace: obi]  
The Ontology for Biomedical Investigations (OBI) project is developing an integrated ontology for the description of biological and clinical investiga...
The Ontology for Biomedical Investigations (OBI) project is developing an integrated ontology for the description of biological and clinical investigations. The ontology will represent the design of an investigation, the protocols and instrumentation used, the material used, the data generated and the type analysis performed on it. Currently OBI is being built under the Basic Formal Ontology (BFO).

Synonyms: OBI
URI: http://identifiers.org/obi
Identifier pattern: (^OBI:\d{7}$)|(^OBI_\d{7}$)
Example: http://identifiers.org/obi:OBI:0000225
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