URL: http://compbio.mit.edu/cummeRbund/index.html
Proper Citation: CummeRbund (RRID:SCR_014568)
Description: Software R package used for simplifying and analyzing Cufflink RNA-Seq output. This program takes various output files from a cuffdiff run and creates a SQLite database of the results that will describe the appropriate relationships between the genes, transcripts, transcription start sites and CDS regions.
Resource Type: sequence analysis software, software resource, software application, data processing software, data analysis software
Keywords: r software, cufflink, rna-seq, sqlite, gene, transcript, transcription start site, cds region, r, rnaseq, rna seq, bio.tools, FASEB list
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