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Taxonomy browser (Ascomycota)

Ascomycota

Taxonomy ID: 4890 (for references in articles please use NCBI:txid4890)
current name
Ascomycota
Genbank common name: ascomycetes
NCBI BLAST name: ascomycete fungi
Rank: phylum
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 4 (Mold Mitochondrial; Protozoan Mitochondrial; Coelenterate Mitochondrial; Mycoplasma; Spiroplasma)
Other names:
common name(s) sac fungi
blast name
ascomycete fungi
Lineage( full )
cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya
   Entrez records   
Database name Subtree links Direct links
Nucleotide 13,338,406 17
Protein 44,832,036 -
Structure 11,665 -
Genome 3,872 -
Popset 42,686 3,254
Conserved Domains 687 174
GEO Datasets 141,804 -
PubMed Central 400,184 11,364
Gene 5,182,145 -
HomoloGene 8,813 -
SRA Experiments 334,789 566
GEO Profiles 1,081,065 -
Identical Protein Groups 22,019,300 -
BioProject 28,242 28
BioSample 374,146 450
Assembly 15,438 -
Genetic Testing Registry 1 -
PubChem BioAssay 36,358 -
Taxonomy 115,749 1

Comments and References:

Ascomycota
Classification of the Ascomycota follows that of O. E. Eriksson et al., Outline of Ascomycota - 2003, Myconet vol. 9.
Schoch et al (2009b)
Schoch CL, Sung GH, Lopez-Giraldez F, Townsend JP, Miadlikowska J, Hofstetter V, Robbertse B, Matheny PB, Kauff F, Wang Z, Gueidan C, Andrie RM, Trippe K, Ciufetti LM, Wynns A, Fraker E, Hodkinson BP, Bonito G, Groenewald JZ, Arzanlou M, de Hoog GS, Crous PW, Hewitt D, Pfister DH, Peterson K, Gryzenhout M, Wingfield MJ, Aptroot A, Suh SO, Blackwell M, Hillis DM, Griffith GW, Castlebury LA, Rossman AY, Lumbsch HT, Lucking R, Budel B, Rauhut A, Diederich P, Ertz D, Geiser DM, Hosaka K, Inderbitzin P, Kohlmeyer J, Volkmann-Kohlmeyer B, Mostert L, O'Donnell K, Sipman H, Rogers JD, Shoemaker RA, Sugiyama J, Summerbell RC, Untereiner W, Johnston PR, Stenroos S, Zuccaro A, Dyer PS, Crittenden PD, Cole MS, Hansen K, Trappe JM, Yahr R, Lutzoni F, Spatafora JW, 2009. The Ascomycota Tree of Life: A Phylum-wide Phylogeny Clarifies the Origin and Evolution of Fundamental Reproductive and Ecological Traits. Systematic Biology 58: 224-239.
Schoch et al. (2009a)
Schoch CL, Wang Z, Townsend JP, Spatafora JW, 2009. Geoglossomycetes cl. nov., Geoglossales ord. nov. and taxa above class rank in the Ascomycota Tree of Life. Persoonia 22: 129-138.
Spatafora et al. (2017), doi:10.1128/microbiolspec.FUNK-0053-2016
Spatafora J.W. et al. 2017. The Fungal Tree of Life: from Molecular Systematics to Genome-Scale Phylogenies. Microbiol Spectrum 5(5):FUNK-0053-2016.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Ascomycota taxonomy taxonomy/phylogenetic Arctos Specimen Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Ascomycota culture/stock collections Global Catalogue of Microorganisms
Ascomycota taxonomy/phylogenetic Integrated Taxonomic Information System
Ascomycota taxonomy/phylogenetic Lifemap
2 records from this provider taxonomy/phylogenetic MycoBank
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Ascomycota Whittaker, 1959 taxonomy/phylogenetic Ocean Biogeographic Information System
ToL taxonomy/phylogenetic Tree of Life
2 records from this provider taxonomy/phylogenetic TreeBase
Ascomycota Whittaker, 1959 taxonomy/phylogenetic World Register of Marine Species
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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