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Series GSE197733 Query DataSets for GSE197733
Status Public on Apr 11, 2022
Title Jasmonates and Histone deacetylase 6 activate Arabidopsis genome-wide histone acetylation and methylation during the early acute stress response
Organism Arabidopsis thaliana
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We report the application of ChIP-Seq of H4ac and H3K27me3 histone modifications to jasmonate-treated wild type (DR5) and HDA6 mutant (axe1-5) whole A. thaliana seedlings
 
Overall design Examination of two different histone modifications in whole A. thaliana seedlings
 
Contributor(s) Devoto A, Vincent SA, Perez-Salamo I
Citation(s) 35399062
Submission date Mar 02, 2022
Last update date Apr 19, 2022
Contact name Alessandra Devoto
E-mail(s) alessandra.devoto@rhul.ac.uk
Organization name Royal Holloway, University of London
Department Biological Sciences
Street address Egham Hill
City Egham
ZIP/Postal code TW20 0EX
Country United Kingdom
 
Platforms (1)
GPL17639 Illumina HiSeq 2500 (Arabidopsis thaliana)
Samples (23)
GSM5929239 DR5 input +JA 1
GSM5929240 DR5 input -JA 1
GSM5929241 axe1-5 input +JA 1
Relations
BioProject PRJNA811774

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE197733_RAW.tar 3.2 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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