URL: http://rnaseq-mats.sourceforge.net/
Proper Citation: Multivariate Analysis of Transcript Splicing (RRID:SCR_013049)
Description: Software tool to detect differential alternative splicing events from RNA-Seq data. Calculates P value and false discovery rate that difference in isoform ratio of gene between two conditions exceeds given user defined threshold. Can automatically detect and analyze alternative splicing events corresponding to all major types of alternative splicing patterns. Handles replicate RNA-Seq data from both paired and unpaired study design.
Abbreviations: MATS
Synonyms: RNAseq MATS, RMATS, rMATS, MATS, RNA MATS
Resource Type: software application, data analysis software, software resource, data processing software
Keywords: Differential alternative splicing events, splicing events calculation, RNA-Seq data, gene isoform ratio, alternative splicing patterns, patterns detection, patterns analysis, replicate RNA-Seq data
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Childrens Hospital of Philadelphia - Research Institute; Pennsylvania; USA |
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