URL: http://ambermd.org/
Proper Citation: Assisted Model Building with Energy Refinement (AMBER) (RRID:SCR_014230)
Description: Software package of molecular simulation programs. It is distributed into AmberTools15 and Amber14. AmberTools15 is a software package which can carry out complete molecular dynamics simulations with either explicit water or generalized Born solvent models. It is distributed in source code format and must be compiled in order to be used. Amber14 builds on AmberTools15 by adding the pmemd program, which provides better performance on multiple CPUs and dramatic speed improvements on GPUs compared to sander (molecular dynamics). GPU info, manuals, and tutorials are available on the website.
Abbreviations: AMBER
Synonyms: Assisted Model Building with Energy Refinement
Resource Type: software resource, software application, standalone software, simulation software
Keywords: molecular simulation, simulation software, software package, molecular dynamics, pmemed, sander, bio.tools
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