X
Forgot Password

If you have forgotten your password you can enter your email here and get a temporary password sent to your email.

Resource Name
RRID:SCR_016944 RRID Copied      
PDF Report How to cite
scran (RRID:SCR_016944)
Copy Citation Copied
Resource Information

URL: https://bioconductor.org/packages/release/bioc/html/scran.html

Proper Citation: scran (RRID:SCR_016944)

Description: Software package for low-level analyses of single-cell RNA-seq data. Used for quality control, data exploration and normalization, cell cycle phase assignment, identification of highly variable and correlated genes, clustering into subpopulations and marker gene detection.

Abbreviations: SCRAN

Synonyms: Single-Cell Rna-seq data ANalysis, SCRAN

Resource Type: software resource, data analysis software, data processing software, software application

Defining Citation: PMID:27909575

Keywords: low, level, analysis, scRNA-seq, data, normalization, cell, cycle, phase, gene, variable, correlation, cluster, subpopulation, marker, bio.tools

Expand All
This resource

is listed by

Bioconductor

is listed by

Debian

is listed by

bio.tools

is related to

R Project for Statistical Computing

Usage and Citation Metrics
We apologize, the data for 2022 is currently unavailable for most resources. We are aware of the issue and are working to resolve it.

We found {{ ctrl2.mentions.total_count }} mentions in open access literature.

We have not found any literature mentions for this resource.

We are searching literature mentions for this resource.

View full usage report

Most recent articles:

{{ mention._source.dc.creators[0].familyName }} {{ mention._source.dc.creators[0].initials }}, et al. ({{ mention._source.dc.publicationYear }}) {{ mention._source.dc.title }} {{ mention._source.dc.publishers[0].name }}, {{ mention._source.dc.publishers[0].volume }}({{ mention._source.dc.publishers[0].issue }}), {{ mention._source.dc.publishers[0].pagination }}. (PMID:{{ mention._id.replace('PMID:', '') }})

Checkfor all resource mentions.

Collaborator Network

A list of researchers who have used the resource and an author search tool

Find mentions based on location


{{ ctrl2.mentions.errors.location }}

A list of researchers who have used the resource and an author search tool. This is available for resources that have literature mentions.

Ratings and Alerts

No rating or validation information has been found for scran.

No alerts have been found for scran.

Data and Source Information