Name: rs779867
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs779867

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr3:7442784 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: T>A / T>C / T>G
Variation Type: SNV Single Nucleotide Variation
Frequency: T=0.287155 (76007/264690, TOPMED)
T=0.262729 (63467/241568, ALFA)
T=0.31250 (24594/78702, PAGE_STUDY) (+ 19 more)
T=0.40328 (11396/28258, 14KJPN)
T=0.39964 (6698/16760, 8.3KJPN)
T=0.3512 (2249/6404, 1000G_30x)
T=0.3564 (1785/5008, 1000G)
T=0.2612 (1170/4480, Estonian)
T=0.2382 (918/3854, ALSPAC)
T=0.2292 (850/3708, TWINSUK)
T=0.4198 (1230/2930, KOREAN)
T=0.3602 (680/1888, HapMap)
T=0.3990 (731/1832, Korea1K)
T=0.3369 (382/1134, Daghestan)
T=0.246 (246/998, GoNL)
T=0.425 (336/790, PRJEB37584)
T=0.243 (146/600, NorthernSweden)
T=0.257 (128/498, SGDP_PRJ)
T=0.352 (76/216, Qatari)
T=0.449 (96/214, Vietnamese)
T=0.19 (10/54, Siberian)
T=0.20 (8/40, GENOME_DK)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: GRM7 : Intron Variant
Publications: 7 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	246604	T=0.263094	C=0.736906, G=0.000000
European	Sub	214914	T=0.254828	C=0.745172, G=0.000000
African	Sub	8746	T=0.3559	C=0.6441, G=0.0000
African Others	Sub	316	T=0.351	C=0.649, G=0.000
African American	Sub	8430	T=0.3561	C=0.6439, G=0.0000
Asian	Sub	3826	T=0.4156	C=0.5844, G=0.0000
East Asian	Sub	3076	T=0.4353	C=0.5647, G=0.0000
Other Asian	Sub	750	T=0.335	C=0.665, G=0.000
Latin American 1	Sub	1034	T=0.3124	C=0.6876, G=0.0000
Latin American 2	Sub	8196	T=0.2604	C=0.7396, G=0.0000
South Asian	Sub	302	T=0.447	C=0.553, G=0.000
Other	Sub	9586	T=0.2941	C=0.7059, G=0.0000

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	T=0.287155	C=0.712845
Allele Frequency Aggregator	Total	Global	241568	T=0.262729	C=0.737271, G=0.000000
Allele Frequency Aggregator	European	Sub	211820	T=0.254943	C=0.745057, G=0.000000
Allele Frequency Aggregator	Other	Sub	8786	T=0.2935	C=0.7065, G=0.0000
Allele Frequency Aggregator	Latin American 2	Sub	8196	T=0.2604	C=0.7396, G=0.0000
Allele Frequency Aggregator	African	Sub	7604	T=0.3556	C=0.6444, G=0.0000
Allele Frequency Aggregator	Asian	Sub	3826	T=0.4156	C=0.5844, G=0.0000
Allele Frequency Aggregator	Latin American 1	Sub	1034	T=0.3124	C=0.6876, G=0.0000
Allele Frequency Aggregator	South Asian	Sub	302	T=0.447	C=0.553, G=0.000
The PAGE Study	Global	Study-wide	78702	T=0.31250	C=0.68750
The PAGE Study	AfricanAmerican	Sub	32516	T=0.33045	C=0.66955
The PAGE Study	Mexican	Sub	10810	T=0.26809	C=0.73191
The PAGE Study	Asian	Sub	8318	T=0.4029	C=0.5971
The PAGE Study	PuertoRican	Sub	7918	T=0.2504	C=0.7496
The PAGE Study	NativeHawaiian	Sub	4534	T=0.3370	C=0.6630
The PAGE Study	Cuban	Sub	4230	T=0.2783	C=0.7217
The PAGE Study	Dominican	Sub	3828	T=0.3015	C=0.6985
The PAGE Study	CentralAmerican	Sub	2450	T=0.2584	C=0.7416
The PAGE Study	SouthAmerican	Sub	1982	T=0.2402	C=0.7598
The PAGE Study	NativeAmerican	Sub	1260	T=0.2325	C=0.7675
The PAGE Study	SouthAsian	Sub	856	T=0.416	C=0.584
14KJPN	JAPANESE	Study-wide	28258	T=0.40328	C=0.59672
8.3KJPN	JAPANESE	Study-wide	16760	T=0.39964	C=0.60036
1000Genomes_30x	Global	Study-wide	6404	T=0.3512	C=0.6488
1000Genomes_30x	African	Sub	1786	T=0.3477	C=0.6523
1000Genomes_30x	Europe	Sub	1266	T=0.2646	C=0.7354
1000Genomes_30x	South Asian	Sub	1202	T=0.4501	C=0.5499
1000Genomes_30x	East Asian	Sub	1170	T=0.4419	C=0.5581
1000Genomes_30x	American	Sub	980	T=0.240	C=0.760
1000Genomes	Global	Study-wide	5008	T=0.3564	C=0.6436
1000Genomes	African	Sub	1322	T=0.3555	C=0.6445
1000Genomes	East Asian	Sub	1008	T=0.4365	C=0.5635
1000Genomes	Europe	Sub	1006	T=0.2684	C=0.7316
1000Genomes	South Asian	Sub	978	T=0.447	C=0.553
1000Genomes	American	Sub	694	T=0.242	C=0.758
Genetic variation in the Estonian population	Estonian	Study-wide	4480	T=0.2612	C=0.7388
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	T=0.2382	C=0.7618
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	T=0.2292	C=0.7708
KOREAN population from KRGDB	KOREAN	Study-wide	2930	T=0.4198	A=0.0000, C=0.5802
HapMap	Global	Study-wide	1888	T=0.3602	C=0.6398
HapMap	American	Sub	766	T=0.339	C=0.661
HapMap	African	Sub	692	T=0.345	C=0.655
HapMap	Asian	Sub	254	T=0.465	C=0.535
HapMap	Europe	Sub	176	T=0.358	C=0.642
Korean Genome Project	KOREAN	Study-wide	1832	T=0.3990	C=0.6010
Genome-wide autozygosity in Daghestan	Global	Study-wide	1134	T=0.3369	C=0.6631
Genome-wide autozygosity in Daghestan	Daghestan	Sub	626	T=0.323	C=0.677
Genome-wide autozygosity in Daghestan	Near_East	Sub	144	T=0.361	C=0.639
Genome-wide autozygosity in Daghestan	Central Asia	Sub	122	T=0.270	C=0.730
Genome-wide autozygosity in Daghestan	Europe	Sub	108	T=0.287	C=0.713
Genome-wide autozygosity in Daghestan	South Asian	Sub	98	T=0.53	C=0.47
Genome-wide autozygosity in Daghestan	Caucasus	Sub	36	T=0.33	C=0.67
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	T=0.246	C=0.754
CNV burdens in cranial meningiomas	Global	Study-wide	790	T=0.425	C=0.575
CNV burdens in cranial meningiomas	CRM	Sub	790	T=0.425	C=0.575
Northern Sweden	ACPOP	Study-wide	600	T=0.243	C=0.757
SGDP_PRJ	Global	Study-wide	498	T=0.257	C=0.743
Qatari	Global	Study-wide	216	T=0.352	C=0.648
A Vietnamese Genetic Variation Database	Global	Study-wide	214	T=0.449	C=0.551
Siberian	Global	Study-wide	54	T=0.19	C=0.81
The Danish reference pan genome	Danish	Study-wide	40	T=0.20	C=0.80

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 3	NC_000003.12:g.7442784T>A
GRCh38.p14 chr 3	NC_000003.12:g.7442784T>C
GRCh38.p14 chr 3	NC_000003.12:g.7442784T>G
GRCh37.p13 chr 3	NC_000003.11:g.7484471T>A
GRCh37.p13 chr 3	NC_000003.11:g.7484471T>C
GRCh37.p13 chr 3	NC_000003.11:g.7484471T>G
GRM7 RefSeqGene	NG_029781.2:g.586671T>A
GRM7 RefSeqGene	NG_029781.2:g.586671T>C
GRM7 RefSeqGene	NG_029781.2:g.586671T>G
GRM7 RefSeqGene	NG_029781.1:g.586670T>A
GRM7 RefSeqGene	NG_029781.1:g.586670T>C
GRM7 RefSeqGene	NG_029781.1:g.586670T>G

Gene: GRM7, glutamate metabotropic receptor 7 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
GRM7 transcript variant 1	NM_000844.4:c.1175-9823T>A	N/A	Intron Variant
GRM7 transcript variant 2	NM_181874.3:c.1175-9823T>A	N/A	Intron Variant
GRM7 transcript variant X4	XM_017006272.2:c.677-9823… XM_017006272.2:c.677-9823T>A	N/A	Intron Variant
GRM7 transcript variant X5	XM_017006273.2:c.677-9823… XM_017006273.2:c.677-9823T>A	N/A	Intron Variant
GRM7 transcript variant X1	XM_047448052.1:c.1175-982… XM_047448052.1:c.1175-9823T>A	N/A	Intron Variant
GRM7 transcript variant X3	XM_047448053.1:c.1175-982… XM_047448053.1:c.1175-9823T>A	N/A	Intron Variant
GRM7 transcript variant X2	XR_001740135.3:n.	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	T=	A	C	G
GRCh38.p14 chr 3	NC_000003.12:g.7442784=	NC_000003.12:g.7442784T>A	NC_000003.12:g.7442784T>C	NC_000003.12:g.7442784T>G
GRCh37.p13 chr 3	NC_000003.11:g.7484471=	NC_000003.11:g.7484471T>A	NC_000003.11:g.7484471T>C	NC_000003.11:g.7484471T>G
GRM7 RefSeqGene	NG_029781.2:g.586671=	NG_029781.2:g.586671T>A	NG_029781.2:g.586671T>C	NG_029781.2:g.586671T>G
GRM7 RefSeqGene	NG_029781.1:g.586670=	NG_029781.1:g.586670T>A	NG_029781.1:g.586670T>C	NG_029781.1:g.586670T>G
GRM7 transcript variant 1	NM_000844.3:c.1175-9823=	NM_000844.3:c.1175-9823T>A	NM_000844.3:c.1175-9823T>C	NM_000844.3:c.1175-9823T>G
GRM7 transcript variant 1	NM_000844.4:c.1175-9823=	NM_000844.4:c.1175-9823T>A	NM_000844.4:c.1175-9823T>C	NM_000844.4:c.1175-9823T>G
GRM7 transcript variant 2	NM_181874.2:c.1175-9823=	NM_181874.2:c.1175-9823T>A	NM_181874.2:c.1175-9823T>C	NM_181874.2:c.1175-9823T>G
GRM7 transcript variant 2	NM_181874.3:c.1175-9823=	NM_181874.3:c.1175-9823T>A	NM_181874.3:c.1175-9823T>C	NM_181874.3:c.1175-9823T>G
GRM7 transcript variant X1	XM_005265095.1:c.1175-9823=	XM_005265095.1:c.1175-9823T>A	XM_005265095.1:c.1175-9823T>C	XM_005265095.1:c.1175-9823T>G
GRM7 transcript variant X4	XM_017006272.2:c.677-9823=	XM_017006272.2:c.677-9823T>A	XM_017006272.2:c.677-9823T>C	XM_017006272.2:c.677-9823T>G
GRM7 transcript variant X5	XM_017006273.2:c.677-9823=	XM_017006273.2:c.677-9823T>A	XM_017006273.2:c.677-9823T>C	XM_017006273.2:c.677-9823T>G
GRM7 transcript variant X1	XM_047448052.1:c.1175-9823=	XM_047448052.1:c.1175-9823T>A	XM_047448052.1:c.1175-9823T>C	XM_047448052.1:c.1175-9823T>G
GRM7 transcript variant X3	XM_047448053.1:c.1175-9823=	XM_047448053.1:c.1175-9823T>A	XM_047448053.1:c.1175-9823T>C	XM_047448053.1:c.1175-9823T>G

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

125 SubSNP, 24 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	KWOK	ss915242	Oct 05, 2000 (86)
2	TSC-CSHL	ss2164467	Oct 23, 2000 (88)
3	YUSUKE	ss4991363	Aug 28, 2002 (108)
4	SC_JCM	ss5722447	Feb 20, 2003 (111)
5	WI_SSAHASNP	ss11531980	Jul 11, 2003 (116)
6	BCM_SSAHASNP	ss14200394	Dec 05, 2003 (119)
7	SSAHASNP	ss22018851	Apr 05, 2004 (121)
8	AFFY	ss76643443	Dec 06, 2007 (129)
9	HGSV	ss84290747	Dec 15, 2007 (130)
10	BCMHGSC_JDW	ss91987413	Mar 24, 2008 (129)
11	HUMANGENOME_JCVI	ss99073616	Feb 06, 2009 (130)
12	BGI	ss103894996	Dec 01, 2009 (131)
13	KRIBB_YJKIM	ss104827075	Feb 06, 2009 (130)
14	1000GENOMES	ss111201661	Jan 25, 2009 (130)
15	1000GENOMES	ss112033238	Jan 25, 2009 (130)
16	ILLUMINA-UK	ss116963261	Feb 14, 2009 (130)
17	ENSEMBL	ss135256903	Dec 01, 2009 (131)
18	ENSEMBL	ss138706002	Dec 01, 2009 (131)
19	GMI	ss155065631	Dec 01, 2009 (131)
20	ILLUMINA	ss160916188	Dec 01, 2009 (131)
21	COMPLETE_GENOMICS	ss161909795	Jul 04, 2010 (132)
22	COMPLETE_GENOMICS	ss163069392	Jul 04, 2010 (132)
23	COMPLETE_GENOMICS	ss166107233	Jul 04, 2010 (132)
24	BUSHMAN	ss202092452	Jul 04, 2010 (132)
25	BCM-HGSC-SUB	ss206019874	Jul 04, 2010 (132)
26	1000GENOMES	ss219963780	Jul 14, 2010 (132)
27	1000GENOMES	ss231695034	Jul 14, 2010 (132)
28	1000GENOMES	ss239131602	Jul 15, 2010 (132)
29	BL	ss252913276	May 09, 2011 (134)
30	GMI	ss277001402	May 04, 2012 (137)
31	GMI	ss284589117	Apr 25, 2013 (138)
32	PJP	ss292855922	May 09, 2011 (134)
33	ILLUMINA	ss481679019	May 04, 2012 (137)
34	ILLUMINA	ss481709927	May 04, 2012 (137)
35	ILLUMINA	ss482677377	Sep 08, 2015 (146)
36	ILLUMINA	ss485634196	May 04, 2012 (137)
37	ILLUMINA	ss537515693	Sep 08, 2015 (146)
38	TISHKOFF	ss556405026	Apr 25, 2013 (138)
39	SSMP	ss650069601	Apr 25, 2013 (138)
40	ILLUMINA	ss778615498	Sep 08, 2015 (146)
41	ILLUMINA	ss783262681	Sep 08, 2015 (146)
42	ILLUMINA	ss784216079	Sep 08, 2015 (146)
43	ILLUMINA	ss832523624	Sep 08, 2015 (146)
44	ILLUMINA	ss834072937	Sep 08, 2015 (146)
45	EVA-GONL	ss978239827	Aug 21, 2014 (142)
46	JMKIDD_LAB	ss1070150909	Aug 21, 2014 (142)
47	1000GENOMES	ss1302680892	Aug 21, 2014 (142)
48	HAMMER_LAB	ss1397328532	Sep 08, 2015 (146)
49	DDI	ss1429320562	Apr 01, 2015 (144)
50	EVA_GENOME_DK	ss1579832068	Apr 01, 2015 (144)
51	EVA_DECODE	ss1587699782	Apr 01, 2015 (144)
52	EVA_UK10K_ALSPAC	ss1606348808	Apr 01, 2015 (144)
53	EVA_UK10K_TWINSUK	ss1649342841	Apr 01, 2015 (144)
54	EVA_SVP	ss1712551044	Apr 01, 2015 (144)
55	ILLUMINA	ss1752483762	Sep 08, 2015 (146)
56	HAMMER_LAB	ss1798805008	Sep 08, 2015 (146)
57	WEILL_CORNELL_DGM	ss1921491079	Feb 12, 2016 (147)
58	ILLUMINA	ss1946073593	Feb 12, 2016 (147)
59	ILLUMINA	ss1958533829	Feb 12, 2016 (147)
60	GENOMED	ss1969315552	Jul 19, 2016 (147)
61	JJLAB	ss2021297727	Sep 14, 2016 (149)
62	USC_VALOUEV	ss2149365101	Dec 20, 2016 (150)
63	HUMAN_LONGEVITY	ss2248837324	Dec 20, 2016 (150)
64	SYSTEMSBIOZJU	ss2625149245	Nov 08, 2017 (151)
65	ILLUMINA	ss2633906923	Nov 08, 2017 (151)
66	GRF	ss2704723367	Nov 08, 2017 (151)
67	ILLUMINA	ss2710964378	Nov 08, 2017 (151)
68	GNOMAD	ss2789199583	Nov 08, 2017 (151)
69	AFFY	ss2985864160	Nov 08, 2017 (151)
70	SWEGEN	ss2991780992	Nov 08, 2017 (151)
71	ILLUMINA	ss3022208198	Nov 08, 2017 (151)
72	BIOINF_KMB_FNS_UNIBA	ss3024411234	Nov 08, 2017 (151)
73	CSHL	ss3344869733	Nov 08, 2017 (151)
74	ILLUMINA	ss3625807278	Oct 11, 2018 (152)
75	ILLUMINA	ss3628582190	Oct 11, 2018 (152)
76	ILLUMINA	ss3631855810	Oct 11, 2018 (152)
77	ILLUMINA	ss3633280618	Oct 11, 2018 (152)
78	ILLUMINA	ss3633997012	Oct 11, 2018 (152)
79	ILLUMINA	ss3634878382	Oct 11, 2018 (152)
80	ILLUMINA	ss3635681246	Oct 11, 2018 (152)
81	ILLUMINA	ss3636574557	Oct 11, 2018 (152)
82	ILLUMINA	ss3637433539	Oct 11, 2018 (152)
83	ILLUMINA	ss3640585685	Oct 11, 2018 (152)
84	ILLUMINA	ss3641141476	Oct 11, 2018 (152)
85	ILLUMINA	ss3641437989	Oct 11, 2018 (152)
86	ILLUMINA	ss3644806121	Oct 11, 2018 (152)
87	URBANLAB	ss3647333258	Oct 11, 2018 (152)
88	ILLUMINA	ss3652674017	Oct 11, 2018 (152)
89	EGCUT_WGS	ss3659680793	Jul 13, 2019 (153)
90	EVA_DECODE	ss3708576668	Jul 13, 2019 (153)
91	ILLUMINA	ss3725987119	Jul 13, 2019 (153)
92	ACPOP	ss3729605427	Jul 13, 2019 (153)
93	ILLUMINA	ss3744209887	Jul 13, 2019 (153)
94	ILLUMINA	ss3745178195	Jul 13, 2019 (153)
95	EVA	ss3759621745	Jul 13, 2019 (153)
96	PAGE_CC	ss3771008232	Jul 13, 2019 (153)
97	ILLUMINA	ss3772674000	Jul 13, 2019 (153)
98	PACBIO	ss3784226289	Jul 13, 2019 (153)
99	PACBIO	ss3789756122	Jul 13, 2019 (153)
100	PACBIO	ss3794629856	Jul 13, 2019 (153)
101	KHV_HUMAN_GENOMES	ss3802773860	Jul 13, 2019 (153)
102	EVA	ss3827645066	Apr 25, 2020 (154)
103	EVA	ss3837244108	Apr 25, 2020 (154)
104	EVA	ss3842667794	Apr 25, 2020 (154)
105	SGDP_PRJ	ss3855162209	Apr 25, 2020 (154)
106	KRGDB	ss3900928340	Apr 25, 2020 (154)
107	KOGIC	ss3950603327	Apr 25, 2020 (154)
108	EVA	ss3984502371	Apr 26, 2021 (155)
109	TOPMED	ss4553218880	Apr 26, 2021 (155)
110	TOMMO_GENOMICS	ss5157662726	Apr 26, 2021 (155)
111	1000G_HIGH_COVERAGE	ss5252942891	Oct 13, 2022 (156)
112	EVA	ss5314830775	Oct 13, 2022 (156)
113	EVA	ss5337696668	Oct 13, 2022 (156)
114	HUGCELL_USP	ss5452456162	Oct 13, 2022 (156)
115	EVA	ss5506875357	Oct 13, 2022 (156)
116	1000G_HIGH_COVERAGE	ss5530724145	Oct 13, 2022 (156)
117	SANFORD_IMAGENETICS	ss5631481438	Oct 13, 2022 (156)
118	TOMMO_GENOMICS	ss5688891397	Oct 13, 2022 (156)
119	EVA	ss5799568469	Oct 13, 2022 (156)
120	YY_MCH	ss5803453769	Oct 13, 2022 (156)
121	EVA	ss5825304674	Oct 13, 2022 (156)
122	EVA	ss5847952364	Oct 13, 2022 (156)
123	EVA	ss5853476487	Oct 13, 2022 (156)
124	EVA	ss5867507893	Oct 13, 2022 (156)
125	EVA	ss5959739139	Oct 13, 2022 (156)
126	1000Genomes	NC_000003.11 - 7484471	Oct 11, 2018 (152)
127	1000Genomes_30x	NC_000003.12 - 7442784	Oct 13, 2022 (156)
128	The Avon Longitudinal Study of Parents and Children	NC_000003.11 - 7484471	Oct 11, 2018 (152)
129	Genome-wide autozygosity in Daghestan	NC_000003.10 - 7459471	Apr 25, 2020 (154)
130	Genetic variation in the Estonian population	NC_000003.11 - 7484471	Oct 11, 2018 (152)
131	The Danish reference pan genome	NC_000003.11 - 7484471	Apr 25, 2020 (154)
132	gnomAD - Genomes Submission ignored due to conflicting rows: Row 98192941 (NC_000003.12:7442783:T:C 100636/139972) Row 98192942 (NC_000003.12:7442783:T:G 0/140034)	-	Apr 26, 2021 (155)
133	gnomAD - Genomes Submission ignored due to conflicting rows: Row 98192941 (NC_000003.12:7442783:T:C 100636/139972) Row 98192942 (NC_000003.12:7442783:T:G 0/140034)	-	Apr 26, 2021 (155)
134	Genome of the Netherlands Release 5	NC_000003.11 - 7484471	Apr 25, 2020 (154)
135	HapMap	NC_000003.12 - 7442784	Apr 25, 2020 (154)
136	KOREAN population from KRGDB	NC_000003.11 - 7484471	Apr 25, 2020 (154)
137	Korean Genome Project	NC_000003.12 - 7442784	Apr 25, 2020 (154)
138	Northern Sweden	NC_000003.11 - 7484471	Jul 13, 2019 (153)
139	The PAGE Study	NC_000003.12 - 7442784	Jul 13, 2019 (153)
140	CNV burdens in cranial meningiomas	NC_000003.11 - 7484471	Apr 26, 2021 (155)
141	Qatari	NC_000003.11 - 7484471	Apr 25, 2020 (154)
142	SGDP_PRJ	NC_000003.11 - 7484471	Apr 25, 2020 (154)
143	Siberian	NC_000003.11 - 7484471	Apr 25, 2020 (154)
144	8.3KJPN	NC_000003.11 - 7484471	Apr 26, 2021 (155)
145	14KJPN	NC_000003.12 - 7442784	Oct 13, 2022 (156)
146	TopMed	NC_000003.12 - 7442784	Apr 26, 2021 (155)
147	UK 10K study - Twins	NC_000003.11 - 7484471	Oct 11, 2018 (152)
148	A Vietnamese Genetic Variation Database	NC_000003.11 - 7484471	Jul 13, 2019 (153)
149	ALFA	NC_000003.12 - 7442784	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs3804974	Oct 08, 2002 (108)
rs60615441	May 26, 2008 (130)
rs386613258	Aug 21, 2014 (142)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
8105734, ss3900928340	NC_000003.11:7484470:T:A	NC_000003.12:7442783:T:A	(self)
ss84290747	NC_000003.9:7459470:T:C	NC_000003.12:7442783:T:C	(self)
304653, ss91987413, ss111201661, ss112033238, ss116963261, ss161909795, ss163069392, ss166107233, ss202092452, ss206019874, ss252913276, ss277001402, ss284589117, ss292855922, ss481679019, ss1397328532, ss1587699782, ss1712551044	NC_000003.10:7459470:T:C	NC_000003.12:7442783:T:C	(self)
13821863, 7659988, 5419041, 5997007, 3363462, 8105734, 2890292, 51712, 3533009, 7179189, 1881455, 15632033, 7659988, 1667478, ss219963780, ss231695034, ss239131602, ss481709927, ss482677377, ss485634196, ss537515693, ss556405026, ss650069601, ss778615498, ss783262681, ss784216079, ss832523624, ss834072937, ss978239827, ss1070150909, ss1302680892, ss1429320562, ss1579832068, ss1606348808, ss1649342841, ss1752483762, ss1798805008, ss1921491079, ss1946073593, ss1958533829, ss1969315552, ss2021297727, ss2149365101, ss2625149245, ss2633906923, ss2704723367, ss2710964378, ss2789199583, ss2985864160, ss2991780992, ss3022208198, ss3344869733, ss3625807278, ss3628582190, ss3631855810, ss3633280618, ss3633997012, ss3634878382, ss3635681246, ss3636574557, ss3637433539, ss3640585685, ss3641141476, ss3641437989, ss3644806121, ss3652674017, ss3659680793, ss3729605427, ss3744209887, ss3745178195, ss3759621745, ss3772674000, ss3784226289, ss3789756122, ss3794629856, ss3827645066, ss3837244108, ss3855162209, ss3900928340, ss3984502371, ss5157662726, ss5314830775, ss5337696668, ss5506875357, ss5631481438, ss5799568469, ss5825304674, ss5847952364, ss5959739139	NC_000003.11:7484470:T:C	NC_000003.12:7442783:T:C	(self)
18250080, 2296480, 6981328, 229701, 22728501, 390596435, 12127034606, ss2248837324, ss3024411234, ss3647333258, ss3708576668, ss3725987119, ss3771008232, ss3802773860, ss3842667794, ss3950603327, ss4553218880, ss5252942891, ss5452456162, ss5530724145, ss5688891397, ss5803453769, ss5853476487, ss5867507893	NC_000003.12:7442783:T:C	NC_000003.12:7442783:T:C	(self)
ss11531980	NT_005927.15:7413316:T:C	NC_000003.12:7442783:T:C	(self)
ss14200394, ss22018851	NT_022517.16:7424470:T:C	NC_000003.12:7442783:T:C	(self)
ss915242, ss2164467, ss4991363, ss5722447, ss76643443, ss99073616, ss103894996, ss104827075, ss135256903, ss138706002, ss155065631, ss160916188	NT_022517.18:7424470:T:C	NC_000003.12:7442783:T:C	(self)
12127034606	NC_000003.12:7442783:T:G	NC_000003.12:7442783:T:G	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

7 citations for rs779867

PMID	Title	Author	Year	Journal
23201551	Role of metabotropic glutamate receptor 7 in autism spectrum disorders: a pilot study.	Yang Y et al.	2013	Life sciences
27312574	Glutamate receptor, metabotropic 7 (GRM7) gene variations and susceptibility to autism: A case-control study.	Noroozi R et al.	2016	Autism research
30610437	GRM7 polymorphisms and risk of schizophrenia in Iranian population.	Azari I et al.	2019	Metabolic brain disease
30616226	A single nucleotide polymorphism in the metabotropic glutamate receptor 7 gene is associated with multiple sclerosis in Iranian population.	Mazdeh M et al.	2019	Multiple sclerosis and related disorders
31170425	Glutamate receptor metabotropic 7 (GRM7) gene polymorphisms in mood disorders and attention deficit hyperactive disorder.	Noroozi R et al.	2019	Neurochemistry international
32011203	GRM7 polymorphisms are not associated with ischemic stroke in Iranian population.	Safari MR et al.	2020	Nucleosides, nucleotides & nucleic acids
32152937	Application of Artificial Neural Network for Prediction of Risk of Multiple Sclerosis Based on Single Nucleotide Polymorphism Genotypes.	Ghafouri-Fard S et al.	2020	Journal of molecular neuroscience

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs779867