Experiment summary for ENCSR163RYW

doi:10.17989/ENCSR163RYW

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
ZNF189
Biosample summary
Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens ZNF189
Biosample Type
cell line
Replication type
isogenic
Description
eGFP-ZNF189 ChIP-seq on human HEK293 cells.
Nucleic acid type
DNA
Size range
450-650

Attribution

ENCODE3 project
Lab
Michael Snyder, Stanford
Award
U54HG006996 (Michael Snyder, Stanford)
Project
ENCODE
External resources
Aliases
michael-snyder:HEK_eGFP-ZNF189_FRT_ChIP
Date submitted
January 20, 2017
Date released
November 28, 2017
Annotation (gkmsvm-model)
Submitter comment
This experiment uses two slightly different protocols for each replicate. Replicate 1 uses 'BravoTruSeq protocol' whereas replicate 2 uses 'TruSeq' protocol.
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag RegulomeDB_2_2

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Modifications
Antibody
Library
11Homo sapiens HEK293 cell line genetically modified (insertion) using site-specific recombination targeting H. sapiens ZNF189ENCBS111GOIENCGM615AHNENCAB976SGGENCLB195KAR
21Homo sapiens HEK293 cell line genetically modified (insertion) using site-specific recombination targeting H. sapiens ZNF189ENCBS082THUENCGM615AHNENCAB615WUNENCLB762ZJL