Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: mmp17a ENSDARG00000078915

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Description

matrix metallopeptidase 17a [Source:ZFIN;Acc:ZDB-GENE-070820-2]

Gene Synonyms

mmp17

Location

Chromosome 21: 14,892,050-15,046,065 reverse strand.

GRCz11:CM002905.2

About this gene

This gene has 2 transcripts (splice variants), 256 orthologues and 28 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000178507.2	mmp17a-202	1725	574aa	ENSDARP00000144401.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286YB36	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000151200.2	mmp17a-201	1653	550aa	ENSDARP00000126006.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3ISV9	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

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Summary

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