Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ttc39c ENSDARG00000102308

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Description

tetratricopeptide repeat domain 39C [Source:ZFIN;Acc:ZDB-GENE-050522-194]

Location

Chromosome 22: 16,350,555-16,377,960 reverse strand.

GRCz11:CM002906.2

About this gene

This gene has 2 transcripts (splice variants), 207 orthologues, 3 paralogues and is associated with 9 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000168170.2	ttc39c-202	4309	579aa	ENSDARP00000135033.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LXE6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000161878.2	ttc39c-201	1006	275aa	ENSDARP00000140059.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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