Description
PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
Gene Synonyms
LIP.1, LIPRIN
Location
Scaffold HG2115_PATCH: 26,511-146,600 forward strand.
GRCh38:ML143359.1
View this gene on the primary assembly.
About this gene
This gene has 23 transcripts (splice variants) and 1 gene allele.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | RefSeq Match | Flags |
|---|---|---|---|---|---|---|---|---|
| ENST00000710563.1 | PPFIA1-234 | 6051 | 1242aa | ENSP00000518346.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000672559.2 | PPFIA1-228 | 5240 | 1202aa | ENSP00000500898.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000672873.2 | PPFIA1-230 | 3951 | 1185aa | ENSP00000500481.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000710577.1 | PPFIA1-247 | 1362 | 253aa | ENSP00000518351.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000710566.1 | PPFIA1-237 | 1168 | 389aa | ENSP00000518349.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000710565.1 | PPFIA1-236 | 712 | 237aa | ENSP00000518348.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000710561.1 | PPFIA1-232 | 575 | 158aa | ENSP00000518344.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000710562.1 | PPFIA1-233 | 563 | 99aa | ENSP00000518345.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000673366.2 | PPFIA1-231 | 5758 | 166aa | ENSP00000500719.1 | Nonsense mediated decay | - | - | |
| ENST00000672685.2 | PPFIA1-229 | 5159 | 583aa | ENSP00000500022.2 | Nonsense mediated decay | - | - | |
| ENST00000710564.1 | PPFIA1-235 | 4546 | 386aa | ENSP00000518347.1 | Nonsense mediated decay | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000710573.1 | PPFIA1-243 | 898 | No protein | - | Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined | - | - | |
| ENST00000710572.1 | PPFIA1-242 | 793 | No protein | - | Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined | - | - | |
| ENST00000710571.1 | PPFIA1-241 | 587 | No protein | - | Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined | - | - | |
| ENST00000710575.1 | PPFIA1-245 | 573 | No protein | - | Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined | - | - | |
| ENST00000710574.1 | PPFIA1-244 | 568 | No protein | - | Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined | - | - | |
| ENST00000710567.1 | PPFIA1-238 | 553 | No protein | - | Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined | - | - | |
| ENST00000710569.1 | PPFIA1-239 | 536 | No protein | - | Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined | - | - | |
| ENST00000710579.1 | PPFIA1-249 | 371 | No protein | - | Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined | - | - | |
| ENST00000710580.1 | PPFIA1-250 | 3807 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | |
| ENST00000710578.1 | PPFIA1-248 | 3774 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | |
| ENST00000710576.1 | PPFIA1-246 | 598 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | |
| ENST00000710570.1 | PPFIA1-240 | 514 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - |
