Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Comparative Genomics
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Gene: 1700047M11Rik ENSMUSG00000100147

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Description

RIKEN cDNA 1700047M11 gene [Source:MGI Symbol;Acc:MGI:1914580]

Location

Chromosome 1: 182,115,506-182,130,890 forward strand.

GRCm39:CM000994.3

About this gene

This gene has 6 transcripts (splice variants) and 3 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000189594.2	1700047M11Rik-202	2607	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000244661.1	1700047M11Rik-204	853	No protein	-	lncRNA		-
ENSMUST00000246608.1	1700047M11Rik-206	802	No protein	-	lncRNA		The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000241209.1	1700047M11Rik-203	781	No protein	-	lncRNA		-
ENSMUST00000246234.1	1700047M11Rik-205	777	No protein	-	lncRNA		-
ENSMUST00000185216.3	1700047M11Rik-201	684	No protein	-	lncRNA		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

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Summary

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