Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Cspg4b ENSRNOG00000039582

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Description

chondroitin sulfate proteoglycan 4B [Source:RGD Symbol;Acc:1561161]

Gene Synonyms

LOC294747, RGD1561161

Location

Primary_assembly 2: 44,940,080-45,008,284 forward strand.

mRatBN7.2:CM026975.1

About this gene

This gene has 2 transcripts (splice variants), 225 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000060673.5	Cspg4b-201	9261	2391aa	ENSRNOP00000057404.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4AE71	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000085826.2	Cspg4b-202	8796	2236aa	ENSRNOP00000074606.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K8H2	-

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Summary

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