Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Snx3 ENSRNOG00000046705

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Description

sorting nexin 3 [Source:RGD Symbol;Acc:1595151]

Gene Synonyms

LOC684097

Location

Primary_assembly 20: 45,992,720-46,025,379 forward strand.

mRatBN7.2:CM026993.1

About this gene

This gene has 3 transcripts (splice variants), 227 orthologues, 16 paralogues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000074532.4	Snx3-201	1109	162aa	ENSRNOP00000092005.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5U211	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000075924.2	Snx3-202	1606	154aa	ENSRNOP00000087527.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A603	-
ENSRNOT00000103931.1	Snx3-203	931	130aa	ENSRNOP00000082616.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZVK8	-

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Summary

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