Alpha-catenin-like protein hmp-1 [Source:NCBI gene;Acc:179624]
Chromosome V: 11,845,871-11,852,166 forward strand.
WBcel235:BX284605.5
This gene has 7 transcripts (splice variants), 746 orthologues and 2 paralogues.
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Alpha-catenin-like protein hmp-1 [Source:NCBI gene;Acc:179624]
Chromosome V: 11,845,871-11,852,166 forward strand.
WBcel235:BX284605.5
This gene has 7 transcripts (splice variants), 746 orthologues and 2 paralogues.
Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
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R13H4.4f.1 | - | 4465 | 863aa | R13H4.4f.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I7J4D2 | - |
R13H4.4f.2 | - | 3564 | 863aa | R13H4.4f.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I7J4D2 | - |
R13H4.4d.1 | - | 3281 | 883aa | R13H4.4d.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I7K4K5 | - |
R13H4.4b.1 | - | 3189 | 930aa | R13H4.4b.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A5JYX3 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
R13H4.4a.1 | - | 3179 | 927aa | R13H4.4a.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | P90947 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
R13H4.4e.1 | - | 2652 | 883aa | R13H4.4e.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I7LFF2 | - |
R13H4.4c.1 | - | 198 | 65aa | R13H4.4c.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GUG3 | - |
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Ensembl release 111 - January 2024 ©
EMBL-EBI
EMBL-EBI
http://useast.ensembl.org
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