EGF-like domain-containing protein; Protein lin-3 [Source:NCBI gene;Acc:178001]
Chromosome IV: 11,054,308-11,063,768 forward strand.
WBcel235:BX284604.4
This gene has 11 transcripts (splice variants).
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| F36H1.4d.1 | - | 2085 | 462aa | F36H1.4d.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q03345 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| F36H1.4a.1 | - | 2035 | 438aa | F36H1.4a.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q03345 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| F36H1.4h.1 | - | 1996 | 421aa | F36H1.4h.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A061AD43 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| F36H1.4b.2 | - | 1944 | 436aa | F36H1.4b.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q03345 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| F36H1.4c.1 | - | 1869 | 423aa | F36H1.4c.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q03345 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| F36H1.4h.2 | - | 1805 | 421aa | F36H1.4h.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A061AD43 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| F36H1.4b.1 | - | 1790 | 436aa | F36H1.4b.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q03345 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| F36H1.4g.1 | - | 1549 | 464aa | F36H1.4g.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A061AEC4 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| F36H1.4f.1 | lin-3-210 | 1434 | 477aa | F36H1.4f.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q03345 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| F36H1.4b.3 | - | 1338 | 436aa | F36H1.4b.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q03345 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| F36H1.4e.1 | lin-3-211 | 1299 | 432aa | F36H1.4e.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q03345 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
