Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Ca-alpha1D FBgn0001991

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Description

Ca[2+]-channel protein alpha[[1]] subunit D

Gene Synonyms

Ca-alpha1D

Location

Primary_assembly 2L: 16,165,831-16,190,540 forward strand.

BDGP6.46:AE014134.6

About this gene

This gene has 10 transcripts (splice variants), 3 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0479786	Ca-alpha1D-RM	8986	2705aa	FBpp0428119	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
FBtr0479784	Ca-alpha1D-RK	9425	2669aa	FBpp0428117	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q24270	-
FBtr0479787	Ca-alpha1D-RN	9298	2453aa	FBpp0428120	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
FBtr0479785	Ca-alpha1D-RL	8973	2672aa	FBpp0428118	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
FBtr0479788	Ca-alpha1D-RO	8968	2699aa	FBpp0428121	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PDI1	-
FBtr0332025	Ca-alpha1D-RJ	8450	2059aa	FBpp0304341	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PDI5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
FBtr0332022	Ca-alpha1D-RG	8226	1799aa	FBpp0304338	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PFZ4	-
FBtr0332024	Ca-alpha1D-RI	7890	2026aa	FBpp0304340	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PD04	-
FBtr0332021	Ca-alpha1D-RF	7881	2023aa	FBpp0304337	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PD78	-
FBtr0332023	Ca-alpha1D-RH	7881	2023aa	FBpp0304339	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PBC0	-

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Summary

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