Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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Ontologies
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Genetic Variation
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- Structural variants
Gene expression
Pathway
Molecular interactions
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ID History
- Gene history

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Gene: ss FBgn0003513

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Description

spineless

Gene Synonyms

ss

Location

Primary_assembly 3R: 16,374,434-16,403,690 reverse strand.

BDGP6.46:AE014297.3

About this gene

This gene has 3 transcripts (splice variants) and 804 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0306026	ss-RC	4019	1015aa	FBpp0297168	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JIM6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
FBtr0083318	ss-RA	5184	884aa	FBpp0082768	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O61543 Q8MSL0 Q9VEV9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
FBtr0306027	ss-RD	3997	1015aa	FBpp0297169	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JIM6	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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