Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: stck FBgn0020249

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Description

steamer duck

Gene Synonyms

stck

Location

Primary_assembly 3R: 8,356,978-8,359,964 forward strand.

BDGP6.46:AE014297.3

About this gene

This gene has 4 transcripts (splice variants), 425 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0081846	stck-RC	1335	348aa	FBpp0081336	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8INQ9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
FBtr0306260	stck-RD	1500	335aa	FBpp0297370	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9XYA7	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
FBtr0081845	stck-RB	1388	345aa	FBpp0081335	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IGP6 Q8INR0	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
FBtr0081844	stck-RA	1380	335aa	FBpp0081334	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9XYA7	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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