CG3588
Primary_assembly X: 2,919,770-2,924,426 forward strand.
BDGP6.46:AE014298.5
This gene has 5 transcripts (splice variants).
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| FBtr0301058 | CG3588-RE | 2928 | 891aa | FBpp0290280 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | O76869 Q8I072 Q8I081 Q8I6C0 Q8I6C1 Q8I6C2 Q8I6C3 Q8I6C4 Q8I6C6 Q8I6C7 Q8I6C8 Q9W4V1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| FBtr0332426 | CG3588-RI | 3244 | 662aa | FBpp0304699 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M9PGW5 Q8I097 Q8I6B9 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0301061 | CG3588-RH | 2471 | 659aa | FBpp0290283 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q8IRV2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0301060 | CG3588-RG | 2277 | 659aa | FBpp0290282 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q8IRV2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0301059 | CG3588-RF | 2193 | 631aa | FBpp0290281 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F3YDN9 Q8IRV3 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
