Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
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- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
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ID History
- Gene history

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Gene: santa-maria FBgn0025697

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Description

scavenger receptor acting in neural tissue and majority of rhodopsin is absent

Gene Synonyms

santa-maria

Location

Primary_assembly 2L: 7,445,355-7,451,244 reverse strand.

BDGP6.46:AE014134.6

About this gene

This gene has 2 transcripts (splice variants), 205 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0346571	santa-maria-RC	5563	563aa	FBpp0312169	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VM10	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
FBtr0079464	santa-maria-RA	2302	563aa	FBpp0079088	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C9QPI3 Q961H6 Q9VM10	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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