Rho GTPase activating protein at 1A
RhoGAP1A
Primary_assembly X: 127,449-140,340 forward strand.
BDGP6.46:AE014298.5
This gene has 6 transcripts (splice variants) and 554 orthologues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| FBtr0340054 | RhoGAP1A-RE | 5089 | 1404aa | FBpp0309061 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | O96833 Q6W436 Q6W437 Q8MSA6 X2JC00 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| FBtr0340053 | RhoGAP1A-RD | 5083 | 1402aa | FBpp0309060 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q6W453 X2J9V9 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0112919 | RhoGAP1A-RA | 5082 | 1403aa | FBpp0111832 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q29QE1 Q6W434 Q6W456 Q9XZS6 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0112920 | RhoGAP1A-RB | 5012 | 1403aa | FBpp0111833 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q29QE1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0302200 | RhoGAP1A-RC | 4254 | 903aa | FBpp0291410 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C1C560 Q4V5A6 | - |
| FBtr0340055 | RhoGAP1A-RF | 3824 | 903aa | FBpp0309062 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C1C560 | - |
