Histone deacetylase 6
HDAC6
Primary_assembly X: 15,333,310-15,340,360 forward strand.
BDGP6.46:AE014298.5
This gene has 7 transcripts (splice variants), 184 orthologues and 4 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| FBtr0330405 | HDAC6-RG | 4483 | 1179aa | FBpp0303431 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M9PJN5 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, |
| FBtr0074008 | HDAC6-RA | 4483 | 1128aa | FBpp0073825 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C5I798 C5I7C2 C5I7E6 C5I7G2 C5I7H8 C5I7Q8 I1V507 Q86NK9 | APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2, |
| FBtr0074009 | HDAC6-RC | 4241 | 1138aa | FBpp0073826 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C5I7A0 C5I7C4 C5I7E8 C5I7G4 C5I7I0 C5I7R0 I1V508 Q8IR37 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0074010 | HDAC6-RB | 3848 | 1135aa | FBpp0073827 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C5I799 C5I7C3 C5I7E7 C5I7G3 C5I7H9 C5I7Q9 I1V506 Q8IR38 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0307383 | HDAC6-RE | 3817 | 1108aa | FBpp0298372 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M9NGF7 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0301774 | HDAC6-RD | 3451 | 883aa | FBpp0290988 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9XYX1 | - |
| FBtr0307384 | HDAC6-RF | 3272 | 1022aa | FBpp0298373 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C6TPA9 M9NEH6 | - |
