Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
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- Structural variants
Gene expression
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- Gene history

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Gene: Tsp42Ea FBgn0029508

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Description

Tetraspanin 42Ea

Gene Synonyms

Tsp42Ea

Location

Primary_assembly 2R: 6,992,676-7,004,259 forward strand.

BDGP6.46:AE013599.5

About this gene

This gene has 3 transcripts (splice variants) and 23 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0086171	Tsp42Ea-RA	1118	226aa	FBpp0085503	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7K1I4 Q9U3V4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
FBtr0086172	Tsp42Ea-RB	1113	226aa	FBpp0085504	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7K1I4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
FBtr0086173	Tsp42Ea-RC	1107	226aa	FBpp0085505	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7K1I4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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