Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
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ID History
- Gene history

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Gene: Shmt FBgn0029823

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Description

Serine hydroxymethyl transferase

Gene Synonyms

Shmt

Location

Primary_assembly X: 5,913,067-5,916,797 reverse strand.

BDGP6.46:AE014298.5

About this gene

This gene has 3 transcripts (splice variants) and 215 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0070827	Shmt-RA	2001	537aa	FBpp0070792	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W457	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
FBtr0290235	Shmt-RB	2054	467aa	FBpp0288674	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9YJ06 A9YJ07 A9YJ11 B7Z0X1 F6J3U3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
FBtr0345317	Shmt-RC	1592	467aa	FBpp0311477	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z0X1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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