Rab3 GDP-GTP exchange factor
Rab3-GEF
Primary_assembly X: 15,089,682-15,113,762 forward strand.
BDGP6.46:AE014298.5
This gene has 10 transcripts (splice variants) and 217 orthologues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| FBtr0330401 | Rab3-GEF-RH | 8285 | 2154aa | FBpp0303427 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M9PEM6 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, |
| FBtr0330400 | Rab3-GEF-RG | 8459 | 1819aa | FBpp0303426 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M9PJN3 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0452147 | Rab3-GEF-RK | 8459 | 2147aa | FBpp0402897 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1Z1CSK9 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0307208 | Rab3-GEF-RD | 8390 | 2130aa | FBpp0298037 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M9NGF2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0307209 | Rab3-GEF-RE | 8372 | 2124aa | FBpp0298038 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A8JUX2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0452146 | Rab3-GEF-RJ | 8363 | 2115aa | FBpp0402896 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1Z1CGX2 A0A3G1DKV1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0346798 | Rab3-GEF-RI | 8285 | 2095aa | FBpp0312376 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0S0X7U5 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0307207 | Rab3-GEF-RC | 8252 | 2084aa | FBpp0298036 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9VXY2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0452148 | Rab3-GEF-RL | 6000 | 1882aa | FBpp0402898 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1Z1CGY3 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| FBtr0307210 | Rab3-GEF-RF | 5820 | 1822aa | FBpp0298039 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D2NUF8 M9NEH3 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
