Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: Lrch FBgn0032633

.

Description

Leucine-rich-repeats and calponin homology domain protein

Gene Synonyms

Lrch

Location

Primary_assembly 2L: 17,367,511-17,384,115 reverse strand.

BDGP6.46:AE014134.6

About this gene

This gene has 3 transcripts (splice variants), 210 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0080969	Lrch-RB	4427	1135aa	FBpp0080522	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VJE6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
FBtr0339797	Lrch-RC	5650	1079aa	FBpp0308842	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JA56	-
FBtr0080968	Lrch-RA	3449	809aa	FBpp0080521	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q960C5	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

.

Summary

.

.