Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Pgant6 FBgn0035375

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Description

Polypeptide N-Acetylgalactosaminyltransferase 6

Gene Synonyms

Pgant6

Location

Primary_assembly 3L: 2,782,255-2,786,010 forward strand.

BDGP6.46:AE014296.5

About this gene

This gene has 3 transcripts (splice variants), 1772 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0072973	Pgant6-RB	2817	666aa	FBpp0072843	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PBK1 Q6WV16	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
FBtr0333442	Pgant6-RC	2758	666aa	FBpp0305633	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PBK1 Q6WV16	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
FBtr0072972	Pgant6-RA	2675	666aa	FBpp0072842	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PBK1 Q6WV16	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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