Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
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- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
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ID History
- Gene history

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Gene: Ekar FBgn0039916

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Description

Eye-enriched kainate receptor

Gene Synonyms

Ekar

Location

Primary_assembly 4: 636,131-646,556 reverse strand.

BDGP6.46:AE014135.4

About this gene

This gene has 3 transcripts (splice variants), 3630 orthologues and 36 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0110906	Ekar-RB	2913	899aa	FBpp0110206	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0KIF2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
FBtr0089102	Ekar-RA	2971	669aa	FBpp0088171	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B6IDJ4 Q8MQM7 Q9V4E9	-
FBtr0344874	Ekar-RD	2910	898aa	FBpp0311188	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A023GQ97	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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