Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
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ID History
- Gene history

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Gene: Jafrac1 FBgn0040309

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Description

thioredoxin peroxidase 1

Gene Synonyms

Jafrac1

Location

Primary_assembly X: 13,329,824-13,331,994 forward strand.

BDGP6.46:AE014298.5

About this gene

This gene has 5 transcripts (splice variants), 12 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0339700	Jafrac1-RD	1080	194aa	FBpp0308757	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9V3P0 X2JF59	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
FBtr0339699	Jafrac1-RC	1051	194aa	FBpp0308756	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9V3P0 X2JF59	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
FBtr0073763	Jafrac1-RB	1014	194aa	FBpp0073594	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9V3P0 X2JF59	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
FBtr0073764	Jafrac1-RA	1010	194aa	FBpp0073595	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9V3P0 X2JF59	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
FBtr0345161	Jafrac1-RE	976	194aa	FBpp0311371	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6J6B9 Q9V3P0 X2JF59	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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