| FBtr0340105 | Sec16-RI | 7635 | 2326aa | FBpp0309104 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A9YGW7 A9YGX4 F6J236
X2JEM2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| FBtr0340106 | Sec16-RJ | 8008 | 2242aa | FBpp0309105 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | X2JEY9 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0310304 | Sec16-RF | 7900 | 2250aa | FBpp0301987 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M9PHF1 Q8SXX7 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0340104 | Sec16-RH | 7693 | 2137aa | FBpp0309103 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | X2JJP5 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0113444 | Sec16-RD | 7320 | 2221aa | FBpp0112356 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A8JUU3 A9YGX8 A9YGY7
F6J248 F6J249 F6J250
Q5BI67 Q8T0U9 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0113445 | Sec16-RE | 7226 | 2021aa | FBpp0112357 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A8JUU1 Q5BI67 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
