Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: beta-Spec FBgn0250788

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Description

beta Spectrin

Gene Synonyms

beta-Spec

Location

Primary_assembly X: 17,657,372-17,669,371 forward strand.

BDGP6.46:AE014298.5

About this gene

This gene has 3 transcripts (splice variants), 321 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0334404	beta-Spec-RB	7718	2308aa	FBpp0306507	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PF16	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
FBtr0334405	beta-Spec-RC	7896	2147aa	FBpp0306508	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PHG4	-
FBtr0074454	beta-Spec-RA	7671	2291aa	FBpp0074228	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q00963 X4YME1	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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