Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CG42340 FBgn0259242

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Gene Synonyms

CG42340

Location

Primary_assembly X: 6,423,123-6,524,323 reverse strand.

BDGP6.46:AE014298.5

About this gene

This gene has 4 transcripts (splice variants), 3404 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0479806	CG42340-RE	5085	759aa	FBpp0428139	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6H2EDG1 Q29R21	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
FBtr0299863	CG42340-RC	5725	484aa	FBpp0289141	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z0W7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
FBtr0331297	CG42340-RB	5085	720aa	FBpp0303729	Gene/transcipt that contains an open reading frame (ORF).Protein coding	R9PY17	-
FBtr0332386	CG42340-RD	4614	484aa	FBpp0304660	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z0W7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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