Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
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ID History
- Gene history

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Gene: rdgC FBgn0265959

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Description

retinal degeneration C

Gene Synonyms

rdgC

Location

Primary_assembly 3L: 20,248,080-20,265,554 forward strand.

BDGP6.46:AE014296.5

About this gene

This gene has 5 transcripts (splice variants), 707 orthologues and 18 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0342947	rdgC-RF	4551	746aa	FBpp0309721	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
FBtr0342948	rdgC-RG	4364	746aa	FBpp0309722	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B5RJI7 Q9VWA3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
FBtr0342949	rdgC-RH	4189	746aa	FBpp0309723	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
FBtr0342946	rdgC-RB	3879	661aa	FBpp0309720	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P40421	-
FBtr0473730	rdgC-RI	3702	677aa	FBpp0423099	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4D6K426	-

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Summary

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