red Malpighian tubules
red
Primary_assembly 3R: 14,289,071-14,302,276 forward strand.
BDGP6.46:AE014297.3
This gene has 7 transcripts (splice variants).
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| FBtr0344157 | red-RG | 2535 | 366aa | FBpp0310570 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2Z1YWR5 A0A2Z1Z390 Q961C8 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2, |
| FBtr0082921 | red-RB | 2316 | 366aa | FBpp0082380 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q961C8 | APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2, |
| FBtr0082923 | red-RA | 2169 | 343aa | FBpp0082382 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2Z1Z695 A0A2Z1Z8F4 Q9I7J4 | APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1, |
| FBtr0309999 | red-RF | 2113 | 366aa | FBpp0301705 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q961C8 | APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2, |
| FBtr0309997 | red-RD | 2055 | 343aa | FBpp0301703 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9I7J4 | APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1, |
| FBtr0082922 | red-RC | 1997 | 366aa | FBpp0082381 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q961C8 | APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2, |
| FBtr0309998 | red-RE | 1927 | 343aa | FBpp0301704 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9I7J4 | APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1, |
